Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm13534-201ENSMUST00000121169 513 ntBASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm43137-201ENSMUST00000198052 594 ntBASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav12d-3A0A075B6A4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12d-3A0A075B6A4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-3A0A075B6A4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-3A0A075B6A4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Trav12d-3A0A075B6A4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-3A0A075B6A4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-3A0A075B6A4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-3A0A075B6A4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12d-3A0A075B6A4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm13146-201ENSMUST00000118508 780 ntBASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12d-3A0A075B6A4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.51□□□□□ -0.41
Trav12d-3A0A075B6A4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms