Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav5-4A0A075B652 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav5-4A0A075B652 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Gm13168-201ENSMUST00000121771 632 ntBASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-4A0A075B652 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Gm12085-201ENSMUST00000119263 940 ntBASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Gm37025-201ENSMUST00000195159 829 ntBASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-4A0A075B652 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-4A0A075B652 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms