Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.85□□□□□ -0.03
Trav10A0A075B642 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.85□□□□□ -0.03
Trav10A0A075B642 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.85□□□□□ -0.03
Trav10A0A075B642 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.85□□□□□ -0.03
Trav10A0A075B642 Gm11539-201ENSMUST00000119837 557 ntBASIC14.85□□□□□ -0.03
Trav10A0A075B642 Gm13436-201ENSMUST00000120418 567 ntBASIC14.85□□□□□ -0.03
Trav10A0A075B642 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Mir6982-201ENSMUST00000184354 68 ntBASIC14.85□□□□□ -0.03
Trav10A0A075B642 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav10A0A075B642 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav10A0A075B642 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav10A0A075B642 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav10A0A075B642 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav10A0A075B642 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.83□□□□□ -0.03
Trav10A0A075B642 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav10A0A075B642 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.83□□□□□ -0.03
Trav10A0A075B642 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.83□□□□□ -0.03
Trav10A0A075B642 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav10A0A075B642 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.83□□□□□ -0.04
Trav10A0A075B642 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav10A0A075B642 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav10A0A075B642 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms