Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lime1Q9EQR5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lime1Q9EQR5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lime1Q9EQR5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lime1Q9EQR5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lime1Q9EQR5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lime1Q9EQR5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lime1Q9EQR5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lime1Q9EQR5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lime1Q9EQR5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lime1Q9EQR5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lime1Q9EQR5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lime1Q9EQR5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lime1Q9EQR5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lime1Q9EQR5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lime1Q9EQR5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lime1Q9EQR5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lime1Q9EQR5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lime1Q9EQR5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Lime1Q9EQR5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.65■□□□□ 0.9
Lime1Q9EQR5 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lime1Q9EQR5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lime1Q9EQR5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Lime1Q9EQR5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lime1Q9EQR5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lime1Q9EQR5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lime1Q9EQR5 Zfp131-205ENSMUST00000223812 663 ntBASIC20.62■□□□□ 0.89
Lime1Q9EQR5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.62■□□□□ 0.89
Lime1Q9EQR5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lime1Q9EQR5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lime1Q9EQR5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lime1Q9EQR5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lime1Q9EQR5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lime1Q9EQR5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lime1Q9EQR5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lime1Q9EQR5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lime1Q9EQR5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lime1Q9EQR5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lime1Q9EQR5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lime1Q9EQR5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.58■□□□□ 0.89
Lime1Q9EQR5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.58■□□□□ 0.89
Lime1Q9EQR5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lime1Q9EQR5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lime1Q9EQR5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.57■□□□□ 0.88
Lime1Q9EQR5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lime1Q9EQR5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.57■□□□□ 0.88
Lime1Q9EQR5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lime1Q9EQR5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lime1Q9EQR5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.56■□□□□ 0.88
Lime1Q9EQR5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lime1Q9EQR5 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lime1Q9EQR5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.55■□□□□ 0.88
Lime1Q9EQR5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Gm24970-201ENSMUST00000175582 82 ntBASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Gm9397-201ENSMUST00000200125 605 ntBASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lime1Q9EQR5 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lime1Q9EQR5 Gm30023-201ENSMUST00000197970 889 ntBASIC20.52■□□□□ 0.88
Lime1Q9EQR5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Lime1Q9EQR5 Particl-201ENSMUST00000205370 1560 ntBASIC20.51■□□□□ 0.87
Lime1Q9EQR5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lime1Q9EQR5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.5■□□□□ 0.87
Lime1Q9EQR5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Lime1Q9EQR5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lime1Q9EQR5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lime1Q9EQR5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.49■□□□□ 0.87
Lime1Q9EQR5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lime1Q9EQR5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lime1Q9EQR5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lime1Q9EQR5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lime1Q9EQR5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lime1Q9EQR5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lime1Q9EQR5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Lime1Q9EQR5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lime1Q9EQR5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.46■□□□□ 0.87
Lime1Q9EQR5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Lime1Q9EQR5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
Lime1Q9EQR5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lime1Q9EQR5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lime1Q9EQR5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lime1Q9EQR5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lime1Q9EQR5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.44■□□□□ 0.86
Lime1Q9EQR5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lime1Q9EQR5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lime1Q9EQR5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lime1Q9EQR5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lime1Q9EQR5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Lime1Q9EQR5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 341.3 ms