Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Mmp1bQ9EPL6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp1bQ9EPL6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp1bQ9EPL6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp1bQ9EPL6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Mmp1bQ9EPL6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp1bQ9EPL6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp1bQ9EPL6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp1bQ9EPL6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp1bQ9EPL6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp1bQ9EPL6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp1bQ9EPL6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp1bQ9EPL6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp1bQ9EPL6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp1bQ9EPL6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.58■□□□□ 0.88
Mmp1bQ9EPL6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Mmp1bQ9EPL6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp1bQ9EPL6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp1bQ9EPL6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1bQ9EPL6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp1bQ9EPL6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1bQ9EPL6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.55■□□□□ 0.88
Mmp1bQ9EPL6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp1bQ9EPL6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1bQ9EPL6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp1bQ9EPL6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp1bQ9EPL6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp1bQ9EPL6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp1bQ9EPL6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Mmp1bQ9EPL6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp1bQ9EPL6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp1bQ9EPL6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp1bQ9EPL6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Mmp1bQ9EPL6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Mmp1bQ9EPL6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1bQ9EPL6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1bQ9EPL6 Gm9397-201ENSMUST00000200125 605 ntBASIC20.51■□□□□ 0.87
Mmp1bQ9EPL6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1bQ9EPL6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Mmp1bQ9EPL6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp1bQ9EPL6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp1bQ9EPL6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Mmp1bQ9EPL6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp1bQ9EPL6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.49■□□□□ 0.87
Mmp1bQ9EPL6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp1bQ9EPL6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp1bQ9EPL6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.49■□□□□ 0.87
Mmp1bQ9EPL6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Mmp1bQ9EPL6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp1bQ9EPL6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp1bQ9EPL6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp1bQ9EPL6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp1bQ9EPL6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Mmp1bQ9EPL6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Mmp1bQ9EPL6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp1bQ9EPL6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp1bQ9EPL6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Mmp1bQ9EPL6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp1bQ9EPL6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.45■□□□□ 0.86
Mmp1bQ9EPL6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Mmp1bQ9EPL6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.44■□□□□ 0.86
Mmp1bQ9EPL6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mmp1bQ9EPL6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp1bQ9EPL6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.43■□□□□ 0.86
Mmp1bQ9EPL6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp1bQ9EPL6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp1bQ9EPL6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mmp1bQ9EPL6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Mmp1bQ9EPL6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 Gm24970-201ENSMUST00000175582 82 ntBASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mmp1bQ9EPL6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp1bQ9EPL6 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.4■□□□□ 0.86
Mmp1bQ9EPL6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.4■□□□□ 0.86
Mmp1bQ9EPL6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Mmp1bQ9EPL6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Mmp1bQ9EPL6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Mmp1bQ9EPL6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp1bQ9EPL6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp1bQ9EPL6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp1bQ9EPL6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Mmp1bQ9EPL6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mmp1bQ9EPL6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp1bQ9EPL6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp1bQ9EPL6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.37■□□□□ 0.85
Mmp1bQ9EPL6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mmp1bQ9EPL6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.37■□□□□ 0.85
Mmp1bQ9EPL6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms