Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ap3s1Q9DCR2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ap3s1Q9DCR2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ap3s1Q9DCR2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ap3s1Q9DCR2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ap3s1Q9DCR2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ap3s1Q9DCR2 Gm27322-201ENSMUST00000184007 104 ntBASIC20.9■□□□□ 0.94
Ap3s1Q9DCR2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ap3s1Q9DCR2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ap3s1Q9DCR2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.89■□□□□ 0.94
Ap3s1Q9DCR2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ap3s1Q9DCR2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ap3s1Q9DCR2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ap3s1Q9DCR2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Ap3s1Q9DCR2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ap3s1Q9DCR2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ap3s1Q9DCR2 Gm25262-201ENSMUST00000174934 133 ntBASIC20.88■□□□□ 0.93
Ap3s1Q9DCR2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Ap3s1Q9DCR2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ap3s1Q9DCR2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Ap3s1Q9DCR2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ap3s1Q9DCR2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ap3s1Q9DCR2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.86■□□□□ 0.93
Ap3s1Q9DCR2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ap3s1Q9DCR2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Ap3s1Q9DCR2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ap3s1Q9DCR2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ap3s1Q9DCR2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ap3s1Q9DCR2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ap3s1Q9DCR2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ap3s1Q9DCR2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ap3s1Q9DCR2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ap3s1Q9DCR2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ap3s1Q9DCR2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ap3s1Q9DCR2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ap3s1Q9DCR2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ap3s1Q9DCR2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ap3s1Q9DCR2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ap3s1Q9DCR2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ap3s1Q9DCR2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ap3s1Q9DCR2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ap3s1Q9DCR2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ap3s1Q9DCR2 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.79■□□□□ 0.92
Ap3s1Q9DCR2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ap3s1Q9DCR2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ap3s1Q9DCR2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ap3s1Q9DCR2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ap3s1Q9DCR2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Ap3s1Q9DCR2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Ap3s1Q9DCR2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ap3s1Q9DCR2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ap3s1Q9DCR2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ap3s1Q9DCR2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ap3s1Q9DCR2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ap3s1Q9DCR2 Peli2-204ENSMUST00000226513 1320 ntBASIC20.77■□□□□ 0.91
Ap3s1Q9DCR2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ap3s1Q9DCR2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ap3s1Q9DCR2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ap3s1Q9DCR2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ap3s1Q9DCR2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ap3s1Q9DCR2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ap3s1Q9DCR2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Ap3s1Q9DCR2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ap3s1Q9DCR2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ap3s1Q9DCR2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ap3s1Q9DCR2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ap3s1Q9DCR2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ap3s1Q9DCR2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ap3s1Q9DCR2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ap3s1Q9DCR2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ap3s1Q9DCR2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.73■□□□□ 0.91
Ap3s1Q9DCR2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ap3s1Q9DCR2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ap3s1Q9DCR2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ap3s1Q9DCR2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ap3s1Q9DCR2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms