Protein–RNA interactions for Protein: Q9CR26

Vta1, Vacuolar protein sorting-associated protein VTA1 homolog, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vta1Q9CR26 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Vta1Q9CR26 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Vta1Q9CR26 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.25■■□□□ 1.95
Vta1Q9CR26 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Vta1Q9CR26 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.25■■□□□ 1.95
Vta1Q9CR26 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Vta1Q9CR26 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.25■■□□□ 1.95
Vta1Q9CR26 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Vta1Q9CR26 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Vta1Q9CR26 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.24■■□□□ 1.95
Vta1Q9CR26 Gm4799-201ENSMUST00000095396 657 ntBASIC27.24■■□□□ 1.95
Vta1Q9CR26 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.24■■□□□ 1.95
Vta1Q9CR26 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Vta1Q9CR26 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Vta1Q9CR26 Scarna2-201ENSMUST00000157560 414 ntBASIC27.22■■□□□ 1.95
Vta1Q9CR26 Gm37136-201ENSMUST00000194368 194 ntBASIC27.22■■□□□ 1.95
Vta1Q9CR26 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Vta1Q9CR26 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Vta1Q9CR26 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.21■■□□□ 1.95
Vta1Q9CR26 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.2■■□□□ 1.94
Vta1Q9CR26 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Vta1Q9CR26 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Vta1Q9CR26 Mir3960-201ENSMUST00000198213 73 ntBASIC27.19■■□□□ 1.94
Vta1Q9CR26 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.19■■□□□ 1.94
Vta1Q9CR26 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.19■■□□□ 1.94
Vta1Q9CR26 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.18■■□□□ 1.94
Vta1Q9CR26 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Vta1Q9CR26 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Vta1Q9CR26 Gm9806-201ENSMUST00000051080 552 ntBASIC27.18■■□□□ 1.94
Vta1Q9CR26 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Vta1Q9CR26 Zxda-201ENSMUST00000117281 2621 ntBASIC27.16■■□□□ 1.94
Vta1Q9CR26 Gm11687-201ENSMUST00000118911 886 ntBASIC27.16■■□□□ 1.94
Vta1Q9CR26 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.15■■□□□ 1.94
Vta1Q9CR26 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Vta1Q9CR26 Gm45364-201ENSMUST00000210883 159 ntBASIC27.12■■□□□ 1.93
Vta1Q9CR26 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Vta1Q9CR26 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Vta1Q9CR26 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Vta1Q9CR26 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.11■■□□□ 1.93
Vta1Q9CR26 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Vta1Q9CR26 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Vta1Q9CR26 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Vta1Q9CR26 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Vta1Q9CR26 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.09■■□□□ 1.93
Vta1Q9CR26 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Vta1Q9CR26 Gm16437-201ENSMUST00000025669 507 ntBASIC27.08■■□□□ 1.93
Vta1Q9CR26 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.08■■□□□ 1.93
Vta1Q9CR26 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.07■■□□□ 1.92
Vta1Q9CR26 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Vta1Q9CR26 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Vta1Q9CR26 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Vta1Q9CR26 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Vta1Q9CR26 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Vta1Q9CR26 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.04■■□□□ 1.92
Vta1Q9CR26 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Vta1Q9CR26 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Vta1Q9CR26 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Vta1Q9CR26 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Vta1Q9CR26 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Vta1Q9CR26 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Vta1Q9CR26 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Vta1Q9CR26 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.02■■□□□ 1.92
Vta1Q9CR26 Gm12366-201ENSMUST00000121722 873 ntBASIC27.02■■□□□ 1.92
Vta1Q9CR26 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.02■■□□□ 1.92
Vta1Q9CR26 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Vta1Q9CR26 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.02■■□□□ 1.92
Vta1Q9CR26 Gm5786-201ENSMUST00000085368 882 ntBASIC27.02■■□□□ 1.92
Vta1Q9CR26 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.01■■□□□ 1.91
Vta1Q9CR26 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27■■□□□ 1.91
Vta1Q9CR26 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Vta1Q9CR26 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
Vta1Q9CR26 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.99■■□□□ 1.91
Vta1Q9CR26 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Vta1Q9CR26 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Vta1Q9CR26 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Vta1Q9CR26 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
Vta1Q9CR26 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Vta1Q9CR26 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.98■■□□□ 1.91
Vta1Q9CR26 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Vta1Q9CR26 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Vta1Q9CR26 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Vta1Q9CR26 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Vta1Q9CR26 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vta1Q9CR26 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Vta1Q9CR26 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Vta1Q9CR26 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Vta1Q9CR26 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Vta1Q9CR26 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
Vta1Q9CR26 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.95■■□□□ 1.9
Vta1Q9CR26 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Vta1Q9CR26 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Vta1Q9CR26 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vta1Q9CR26 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vta1Q9CR26 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Vta1Q9CR26 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.93■■□□□ 1.9
Vta1Q9CR26 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.93■■□□□ 1.9
Vta1Q9CR26 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Vta1Q9CR26 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.92■■□□□ 1.9
Vta1Q9CR26 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Vta1Q9CR26 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms