Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb1Q9CQ70 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb1Q9CQ70 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
H2afb1Q9CQ70 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afb1Q9CQ70 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb1Q9CQ70 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb1Q9CQ70 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb1Q9CQ70 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
H2afb1Q9CQ70 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1Q9CQ70 Gm30023-201ENSMUST00000197970 889 ntBASIC19.23■□□□□ 0.67
H2afb1Q9CQ70 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1Q9CQ70 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.23■□□□□ 0.67
H2afb1Q9CQ70 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1Q9CQ70 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
H2afb1Q9CQ70 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1Q9CQ70 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1Q9CQ70 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
H2afb1Q9CQ70 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb1Q9CQ70 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb1Q9CQ70 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
H2afb1Q9CQ70 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1Q9CQ70 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H2afb1Q9CQ70 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb1Q9CQ70 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
H2afb1Q9CQ70 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1Q9CQ70 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H2afb1Q9CQ70 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.17■□□□□ 0.66
H2afb1Q9CQ70 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
H2afb1Q9CQ70 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
H2afb1Q9CQ70 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.15■□□□□ 0.66
H2afb1Q9CQ70 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1Q9CQ70 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1Q9CQ70 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1Q9CQ70 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1Q9CQ70 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1Q9CQ70 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
H2afb1Q9CQ70 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
H2afb1Q9CQ70 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
H2afb1Q9CQ70 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1Q9CQ70 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1Q9CQ70 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
H2afb1Q9CQ70 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb1Q9CQ70 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb1Q9CQ70 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb1Q9CQ70 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb1Q9CQ70 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb1Q9CQ70 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
H2afb1Q9CQ70 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
H2afb1Q9CQ70 Particl-201ENSMUST00000205370 1560 ntBASIC19.12■□□□□ 0.65
H2afb1Q9CQ70 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.12■□□□□ 0.65
H2afb1Q9CQ70 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.12■□□□□ 0.65
H2afb1Q9CQ70 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
H2afb1Q9CQ70 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.1■□□□□ 0.65
H2afb1Q9CQ70 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
H2afb1Q9CQ70 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1Q9CQ70 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
H2afb1Q9CQ70 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb1Q9CQ70 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1Q9CQ70 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb1Q9CQ70 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb1Q9CQ70 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb1Q9CQ70 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb1Q9CQ70 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.06■□□□□ 0.64
H2afb1Q9CQ70 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1Q9CQ70 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.06■□□□□ 0.64
H2afb1Q9CQ70 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1Q9CQ70 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb1Q9CQ70 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb1Q9CQ70 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
H2afb1Q9CQ70 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb1Q9CQ70 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb1Q9CQ70 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb1Q9CQ70 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb1Q9CQ70 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb1Q9CQ70 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
H2afb1Q9CQ70 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
H2afb1Q9CQ70 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb1Q9CQ70 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb1Q9CQ70 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1Q9CQ70 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1Q9CQ70 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb1Q9CQ70 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.02■□□□□ 0.63
H2afb1Q9CQ70 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1Q9CQ70 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1Q9CQ70 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb1Q9CQ70 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
H2afb1Q9CQ70 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19■□□□□ 0.63
H2afb1Q9CQ70 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
H2afb1Q9CQ70 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19■□□□□ 0.63
H2afb1Q9CQ70 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb1Q9CQ70 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
H2afb1Q9CQ70 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb1Q9CQ70 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms