Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf8Q99PV0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Prpf8Q99PV0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.35■□□□□ 0.69
Prpf8Q99PV0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf8Q99PV0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.35■□□□□ 0.69
Prpf8Q99PV0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf8Q99PV0 Gm45364-201ENSMUST00000210883 159 ntBASIC19.34■□□□□ 0.69
Prpf8Q99PV0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf8Q99PV0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.33■□□□□ 0.68
Prpf8Q99PV0 Gm12366-201ENSMUST00000121722 873 ntBASIC19.33■□□□□ 0.68
Prpf8Q99PV0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.33■□□□□ 0.68
Prpf8Q99PV0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.33■□□□□ 0.68
Prpf8Q99PV0 Gm5786-201ENSMUST00000085368 882 ntBASIC19.33■□□□□ 0.68
Prpf8Q99PV0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf8Q99PV0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
Prpf8Q99PV0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf8Q99PV0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf8Q99PV0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
Prpf8Q99PV0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf8Q99PV0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.32■□□□□ 0.68
Prpf8Q99PV0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.31■□□□□ 0.68
Prpf8Q99PV0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prpf8Q99PV0 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.3■□□□□ 0.68
Prpf8Q99PV0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf8Q99PV0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf8Q99PV0 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.29■□□□□ 0.68
Prpf8Q99PV0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf8Q99PV0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf8Q99PV0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf8Q99PV0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.28■□□□□ 0.68
Prpf8Q99PV0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf8Q99PV0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf8Q99PV0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf8Q99PV0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf8Q99PV0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf8Q99PV0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf8Q99PV0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.26■□□□□ 0.67
Prpf8Q99PV0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Prpf8Q99PV0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.26■□□□□ 0.67
Prpf8Q99PV0 Gm11687-201ENSMUST00000118911 886 ntBASIC19.25■□□□□ 0.67
Prpf8Q99PV0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf8Q99PV0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf8Q99PV0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf8Q99PV0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.24■□□□□ 0.67
Prpf8Q99PV0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.24■□□□□ 0.67
Prpf8Q99PV0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf8Q99PV0 Gm9806-201ENSMUST00000051080 552 ntBASIC19.24■□□□□ 0.67
Prpf8Q99PV0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Prpf8Q99PV0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf8Q99PV0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf8Q99PV0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf8Q99PV0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf8Q99PV0 Scarna2-201ENSMUST00000157560 414 ntBASIC19.22■□□□□ 0.67
Prpf8Q99PV0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf8Q99PV0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf8Q99PV0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf8Q99PV0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf8Q99PV0 Gm16437-201ENSMUST00000025669 507 ntBASIC19.2■□□□□ 0.66
Prpf8Q99PV0 Gm4799-201ENSMUST00000095396 657 ntBASIC19.2■□□□□ 0.66
Prpf8Q99PV0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf8Q99PV0 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.2■□□□□ 0.66
Prpf8Q99PV0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf8Q99PV0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Prpf8Q99PV0 Gm15039-201ENSMUST00000118914 875 ntBASIC19.19■□□□□ 0.66
Prpf8Q99PV0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Prpf8Q99PV0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf8Q99PV0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf8Q99PV0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Prpf8Q99PV0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf8Q99PV0 Gm37136-201ENSMUST00000194368 194 ntBASIC19.17■□□□□ 0.66
Prpf8Q99PV0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf8Q99PV0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf8Q99PV0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf8Q99PV0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Prpf8Q99PV0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Prpf8Q99PV0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.16■□□□□ 0.66
Prpf8Q99PV0 Mir3960-201ENSMUST00000198213 73 ntBASIC19.16■□□□□ 0.66
Prpf8Q99PV0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf8Q99PV0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Prpf8Q99PV0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf8Q99PV0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Prpf8Q99PV0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Prpf8Q99PV0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Prpf8Q99PV0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf8Q99PV0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.13■□□□□ 0.65
Prpf8Q99PV0 Gm7332-201ENSMUST00000118351 454 ntBASIC19.13■□□□□ 0.65
Prpf8Q99PV0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf8Q99PV0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Prpf8Q99PV0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf8Q99PV0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Prpf8Q99PV0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf8Q99PV0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Prpf8Q99PV0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf8Q99PV0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Prpf8Q99PV0 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.11■□□□□ 0.65
Prpf8Q99PV0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.09■□□□□ 0.65
Prpf8Q99PV0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.09■□□□□ 0.65
Prpf8Q99PV0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Prpf8Q99PV0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.09■□□□□ 0.65
Prpf8Q99PV0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms