Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.57■■■□□ 2
Trex1Q91XB0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.57■■■□□ 2
Trex1Q91XB0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Trex1Q91XB0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Trex1Q91XB0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Trex1Q91XB0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Trex1Q91XB0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Trex1Q91XB0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Trex1Q91XB0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
Trex1Q91XB0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.54■■■□□ 2
Trex1Q91XB0 Cap2-205ENSMUST00000225824 1634 ntBASIC27.54■■■□□ 2
Trex1Q91XB0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Trex1Q91XB0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.53■■■□□ 2
Trex1Q91XB0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Trex1Q91XB0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
Trex1Q91XB0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Trex1Q91XB0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Trex1Q91XB0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Trex1Q91XB0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Trex1Q91XB0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Trex1Q91XB0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Trex1Q91XB0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Trex1Q91XB0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Trex1Q91XB0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Trex1Q91XB0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Trex1Q91XB0 Gm37136-201ENSMUST00000194368 194 ntBASIC27.45■■□□□ 1.98
Trex1Q91XB0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Trex1Q91XB0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.45■■□□□ 1.98
Trex1Q91XB0 Gm4799-201ENSMUST00000095396 657 ntBASIC27.45■■□□□ 1.98
Trex1Q91XB0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.45■■□□□ 1.98
Trex1Q91XB0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Trex1Q91XB0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Trex1Q91XB0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.43■■□□□ 1.98
Trex1Q91XB0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Trex1Q91XB0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trex1Q91XB0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Trex1Q91XB0 Scarna2-201ENSMUST00000157560 414 ntBASIC27.42■■□□□ 1.98
Trex1Q91XB0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Trex1Q91XB0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Trex1Q91XB0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.41■■□□□ 1.98
Trex1Q91XB0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Trex1Q91XB0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.41■■□□□ 1.98
Trex1Q91XB0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.4■■□□□ 1.98
Trex1Q91XB0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Trex1Q91XB0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.39■■□□□ 1.98
Trex1Q91XB0 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.39■■□□□ 1.98
Trex1Q91XB0 Mir3960-201ENSMUST00000198213 73 ntBASIC27.38■■□□□ 1.97
Trex1Q91XB0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trex1Q91XB0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Trex1Q91XB0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.38■■□□□ 1.97
Trex1Q91XB0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Trex1Q91XB0 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.37■■□□□ 1.97
Trex1Q91XB0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Trex1Q91XB0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.36■■□□□ 1.97
Trex1Q91XB0 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.36■■□□□ 1.97
Trex1Q91XB0 Gm45364-201ENSMUST00000210883 159 ntBASIC27.35■■□□□ 1.97
Trex1Q91XB0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Trex1Q91XB0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
Trex1Q91XB0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trex1Q91XB0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
Trex1Q91XB0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Trex1Q91XB0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trex1Q91XB0 Gm9806-201ENSMUST00000051080 552 ntBASIC27.34■■□□□ 1.97
Trex1Q91XB0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Trex1Q91XB0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Trex1Q91XB0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Trex1Q91XB0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Trex1Q91XB0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trex1Q91XB0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.32■■□□□ 1.96
Trex1Q91XB0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trex1Q91XB0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Trex1Q91XB0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Trex1Q91XB0 Gm11687-201ENSMUST00000118911 886 ntBASIC27.31■■□□□ 1.96
Trex1Q91XB0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Trex1Q91XB0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trex1Q91XB0 Gm16437-201ENSMUST00000025669 507 ntBASIC27.3■■□□□ 1.96
Trex1Q91XB0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trex1Q91XB0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.29■■□□□ 1.96
Trex1Q91XB0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trex1Q91XB0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trex1Q91XB0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trex1Q91XB0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Trex1Q91XB0 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.26■■□□□ 1.95
Trex1Q91XB0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Trex1Q91XB0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trex1Q91XB0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trex1Q91XB0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Trex1Q91XB0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Trex1Q91XB0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trex1Q91XB0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Trex1Q91XB0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Trex1Q91XB0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.21■■□□□ 1.95
Trex1Q91XB0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Trex1Q91XB0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.2■■□□□ 1.94
Trex1Q91XB0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Trex1Q91XB0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.19■■□□□ 1.94
Trex1Q91XB0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trex1Q91XB0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Trex1Q91XB0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Trex1Q91XB0 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms