Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Tmc1Q8R4P5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
Tmc1Q8R4P5 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.94■■■□□ 2.22
Tmc1Q8R4P5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tmc1Q8R4P5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.93■■■□□ 2.22
Tmc1Q8R4P5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tmc1Q8R4P5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
Tmc1Q8R4P5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.92■■■□□ 2.22
Tmc1Q8R4P5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tmc1Q8R4P5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Tmc1Q8R4P5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tmc1Q8R4P5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Tmc1Q8R4P5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
Tmc1Q8R4P5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tmc1Q8R4P5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Tmc1Q8R4P5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tmc1Q8R4P5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tmc1Q8R4P5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Tmc1Q8R4P5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.87■■■□□ 2.21
Tmc1Q8R4P5 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
Tmc1Q8R4P5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Tmc1Q8R4P5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Tmc1Q8R4P5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.86■■■□□ 2.21
Tmc1Q8R4P5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
Tmc1Q8R4P5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Tmc1Q8R4P5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.84■■■□□ 2.21
Tmc1Q8R4P5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.84■■■□□ 2.21
Tmc1Q8R4P5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Tmc1Q8R4P5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tmc1Q8R4P5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Tmc1Q8R4P5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Tmc1Q8R4P5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
Tmc1Q8R4P5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tmc1Q8R4P5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Tmc1Q8R4P5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tmc1Q8R4P5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Tmc1Q8R4P5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.79■■■□□ 2.2
Tmc1Q8R4P5 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Tmc1Q8R4P5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Tmc1Q8R4P5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.78■■■□□ 2.2
Tmc1Q8R4P5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tmc1Q8R4P5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
Tmc1Q8R4P5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tmc1Q8R4P5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Tmc1Q8R4P5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tmc1Q8R4P5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.77■■■□□ 2.2
Tmc1Q8R4P5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tmc1Q8R4P5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tmc1Q8R4P5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
Tmc1Q8R4P5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Tmc1Q8R4P5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.76■■■□□ 2.19
Tmc1Q8R4P5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Tmc1Q8R4P5 Gm24970-201ENSMUST00000175582 82 ntBASIC28.75■■■□□ 2.19
Tmc1Q8R4P5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.74■■■□□ 2.19
Tmc1Q8R4P5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.74■■■□□ 2.19
Tmc1Q8R4P5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Tmc1Q8R4P5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.73■■■□□ 2.19
Tmc1Q8R4P5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Tmc1Q8R4P5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
Tmc1Q8R4P5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Tmc1Q8R4P5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Tmc1Q8R4P5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Tmc1Q8R4P5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.71■■■□□ 2.19
Tmc1Q8R4P5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Tmc1Q8R4P5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Tmc1Q8R4P5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
Tmc1Q8R4P5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Tmc1Q8R4P5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tmc1Q8R4P5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tmc1Q8R4P5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tmc1Q8R4P5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tmc1Q8R4P5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Tmc1Q8R4P5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Tmc1Q8R4P5 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tmc1Q8R4P5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.67■■■□□ 2.18
Tmc1Q8R4P5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Tmc1Q8R4P5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Tmc1Q8R4P5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Tmc1Q8R4P5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Tmc1Q8R4P5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Tmc1Q8R4P5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC28.65■■■□□ 2.18
Tmc1Q8R4P5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Tmc1Q8R4P5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Tmc1Q8R4P5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Tmc1Q8R4P5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Tmc1Q8R4P5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Tmc1Q8R4P5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.64■■■□□ 2.17
Tmc1Q8R4P5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Tmc1Q8R4P5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Tmc1Q8R4P5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Tmc1Q8R4P5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
Tmc1Q8R4P5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Tmc1Q8R4P5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Tmc1Q8R4P5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Tmc1Q8R4P5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.6■■■□□ 2.17
Tmc1Q8R4P5 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tmc1Q8R4P5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Tmc1Q8R4P5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Tmc1Q8R4P5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Tmc1Q8R4P5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.58■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms