Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30,7■■■□□ 2,51
Abca3Q8R420 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30,7■■■□□ 2,51
Abca3Q8R420 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC30,7■■■□□ 2,5
Abca3Q8R420 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC30,69■■■□□ 2,5
Abca3Q8R420 AC154454.1-201ENSMUST00000225253 216 ntBASIC30,69■■■□□ 2,5
Abca3Q8R420 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30,67■■■□□ 2,5
Abca3Q8R420 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30,67■■■□□ 2,5
Abca3Q8R420 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30,66■■■□□ 2,5
Abca3Q8R420 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC30,65■■■□□ 2,5
Abca3Q8R420 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30,63■■■□□ 2,49
Abca3Q8R420 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Abca3Q8R420 Gm16437-201ENSMUST00000025669 507 ntBASIC30,62■■■□□ 2,49
Abca3Q8R420 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Abca3Q8R420 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30,62■■■□□ 2,49
Abca3Q8R420 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC30,61■■■□□ 2,49
Abca3Q8R420 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30,61■■■□□ 2,49
Abca3Q8R420 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30,61■■■□□ 2,49
Abca3Q8R420 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30,61■■■□□ 2,49
Abca3Q8R420 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30,6■■■□□ 2,49
Abca3Q8R420 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,6■■■□□ 2,49
Abca3Q8R420 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30,59■■■□□ 2,49
Abca3Q8R420 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30,59■■■□□ 2,49
Abca3Q8R420 Mir3960-201ENSMUST00000198213 73 ntBASIC30,59■■■□□ 2,49
Abca3Q8R420 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Abca3Q8R420 Gm7332-201ENSMUST00000118351 454 ntBASIC30,56■■■□□ 2,48
Abca3Q8R420 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Abca3Q8R420 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Abca3Q8R420 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30,56■■■□□ 2,48
Abca3Q8R420 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30,55■■■□□ 2,48
Abca3Q8R420 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30,54■■■□□ 2,48
Abca3Q8R420 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Abca3Q8R420 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Abca3Q8R420 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Abca3Q8R420 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC30,53■■■□□ 2,48
Abca3Q8R420 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30,52■■■□□ 2,48
Abca3Q8R420 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30,52■■■□□ 2,48
Abca3Q8R420 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30,51■■■□□ 2,48
Abca3Q8R420 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC30,51■■■□□ 2,47
Abca3Q8R420 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30,51■■■□□ 2,47
Abca3Q8R420 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC30,51■■■□□ 2,47
Abca3Q8R420 AC151971.4-201ENSMUST00000214717 704 ntBASIC30,5■■■□□ 2,47
Abca3Q8R420 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30,5■■■□□ 2,47
Abca3Q8R420 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Abca3Q8R420 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Abca3Q8R420 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Abca3Q8R420 Gm37136-201ENSMUST00000194368 194 ntBASIC30,48■■■□□ 2,47
Abca3Q8R420 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30,48■■■□□ 2,47
Abca3Q8R420 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Abca3Q8R420 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Abca3Q8R420 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Abca3Q8R420 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Abca3Q8R420 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Abca3Q8R420 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Abca3Q8R420 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC30,44■■■□□ 2,46
Abca3Q8R420 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30,43■■■□□ 2,46
Abca3Q8R420 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30,43■■■□□ 2,46
Abca3Q8R420 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30,42■■■□□ 2,46
Abca3Q8R420 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Abca3Q8R420 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30,42■■■□□ 2,46
Abca3Q8R420 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Abca3Q8R420 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30,41■■■□□ 2,46
Abca3Q8R420 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Abca3Q8R420 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Abca3Q8R420 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Abca3Q8R420 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,45
Abca3Q8R420 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30,39■■■□□ 2,45
Abca3Q8R420 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30,38■■■□□ 2,45
Abca3Q8R420 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30,38■■■□□ 2,45
Abca3Q8R420 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Abca3Q8R420 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30,38■■■□□ 2,45
Abca3Q8R420 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Abca3Q8R420 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Abca3Q8R420 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30,37■■■□□ 2,45
Abca3Q8R420 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Abca3Q8R420 Gm14523-201ENSMUST00000117260 558 ntBASIC30,37■■■□□ 2,45
Abca3Q8R420 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Abca3Q8R420 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Abca3Q8R420 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30,36■■■□□ 2,45
Abca3Q8R420 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Abca3Q8R420 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30,35■■■□□ 2,45
Abca3Q8R420 AC122317.2-201ENSMUST00000218708 1248 ntBASIC30,35■■■□□ 2,45
Abca3Q8R420 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC30,35■■■□□ 2,45
Abca3Q8R420 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Abca3Q8R420 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC30,33■■■□□ 2,45
Abca3Q8R420 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30,33■■■□□ 2,45
Abca3Q8R420 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Abca3Q8R420 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30,32■■■□□ 2,44
Abca3Q8R420 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Abca3Q8R420 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC30,3■■■□□ 2,44
Abca3Q8R420 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC30,3■■■□□ 2,44
Abca3Q8R420 Gm9905-201ENSMUST00000065740 1845 ntBASIC30,3■■■□□ 2,44
Abca3Q8R420 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30,3■■■□□ 2,44
Abca3Q8R420 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC30,29■■■□□ 2,44
Abca3Q8R420 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30,29■■■□□ 2,44
Abca3Q8R420 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Abca3Q8R420 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Abca3Q8R420 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30,29■■■□□ 2,44
Abca3Q8R420 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Abca3Q8R420 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Abca3Q8R420 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Retrieved 100 of 76,532 protein–RNA pairs in 24,8 ms