Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pspc1Q8R326 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Pspc1Q8R326 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Pspc1Q8R326 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pspc1Q8R326 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Pspc1Q8R326 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pspc1Q8R326 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
Pspc1Q8R326 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Pspc1Q8R326 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.37■■□□□ 1.97
Pspc1Q8R326 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pspc1Q8R326 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pspc1Q8R326 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.35■■□□□ 1.97
Pspc1Q8R326 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pspc1Q8R326 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.34■■□□□ 1.97
Pspc1Q8R326 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Pspc1Q8R326 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pspc1Q8R326 Gm11175-201ENSMUST00000116172 543 ntBASIC27.33■■□□□ 1.97
Pspc1Q8R326 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.33■■□□□ 1.97
Pspc1Q8R326 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.32■■□□□ 1.96
Pspc1Q8R326 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pspc1Q8R326 Gm6311-201ENSMUST00000073790 878 ntBASIC27.32■■□□□ 1.96
Pspc1Q8R326 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pspc1Q8R326 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pspc1Q8R326 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Pspc1Q8R326 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Pspc1Q8R326 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pspc1Q8R326 Mir6538-201ENSMUST00000183713 110 ntBASIC27.28■■□□□ 1.96
Pspc1Q8R326 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Pspc1Q8R326 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Pspc1Q8R326 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.26■■□□□ 1.95
Pspc1Q8R326 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Pspc1Q8R326 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pspc1Q8R326 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pspc1Q8R326 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.22■■□□□ 1.95
Pspc1Q8R326 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.22■■□□□ 1.95
Pspc1Q8R326 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.22■■□□□ 1.95
Pspc1Q8R326 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Pspc1Q8R326 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Pspc1Q8R326 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pspc1Q8R326 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pspc1Q8R326 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pspc1Q8R326 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Pspc1Q8R326 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.19■■□□□ 1.94
Pspc1Q8R326 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pspc1Q8R326 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Pspc1Q8R326 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pspc1Q8R326 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pspc1Q8R326 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pspc1Q8R326 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pspc1Q8R326 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pspc1Q8R326 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pspc1Q8R326 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pspc1Q8R326 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pspc1Q8R326 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pspc1Q8R326 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pspc1Q8R326 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pspc1Q8R326 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pspc1Q8R326 Gm37136-201ENSMUST00000194368 194 ntBASIC27.1■■□□□ 1.93
Pspc1Q8R326 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pspc1Q8R326 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pspc1Q8R326 Gm4799-201ENSMUST00000095396 657 ntBASIC27.08■■□□□ 1.93
Pspc1Q8R326 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Pspc1Q8R326 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pspc1Q8R326 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Pspc1Q8R326 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pspc1Q8R326 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Pspc1Q8R326 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.04■■□□□ 1.92
Pspc1Q8R326 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Pspc1Q8R326 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pspc1Q8R326 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Pspc1Q8R326 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.01■■□□□ 1.91
Pspc1Q8R326 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pspc1Q8R326 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pspc1Q8R326 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms