Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hist3h2bbQ8CGP0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Hist3h2bbQ8CGP0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hist3h2bbQ8CGP0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Hist3h2bbQ8CGP0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist3h2bbQ8CGP0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist3h2bbQ8CGP0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hist3h2bbQ8CGP0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hist3h2bbQ8CGP0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hist3h2bbQ8CGP0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Hist3h2bbQ8CGP0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hist3h2bbQ8CGP0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist3h2bbQ8CGP0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hist3h2bbQ8CGP0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hist3h2bbQ8CGP0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.08■□□□□ 0.49
Hist3h2bbQ8CGP0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist3h2bbQ8CGP0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hist3h2bbQ8CGP0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Hist3h2bbQ8CGP0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hist3h2bbQ8CGP0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist3h2bbQ8CGP0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hist3h2bbQ8CGP0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.07■□□□□ 0.48
Hist3h2bbQ8CGP0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist3h2bbQ8CGP0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hist3h2bbQ8CGP0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Hist3h2bbQ8CGP0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Hist3h2bbQ8CGP0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist3h2bbQ8CGP0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist3h2bbQ8CGP0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist3h2bbQ8CGP0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist3h2bbQ8CGP0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hist3h2bbQ8CGP0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist3h2bbQ8CGP0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hist3h2bbQ8CGP0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.05■□□□□ 0.48
Hist3h2bbQ8CGP0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist3h2bbQ8CGP0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hist3h2bbQ8CGP0 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.05■□□□□ 0.48
Hist3h2bbQ8CGP0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hist3h2bbQ8CGP0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hist3h2bbQ8CGP0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hist3h2bbQ8CGP0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hist3h2bbQ8CGP0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Hist3h2bbQ8CGP0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hist3h2bbQ8CGP0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hist3h2bbQ8CGP0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hist3h2bbQ8CGP0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
Hist3h2bbQ8CGP0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.01■□□□□ 0.47
Hist3h2bbQ8CGP0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hist3h2bbQ8CGP0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hist3h2bbQ8CGP0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hist3h2bbQ8CGP0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hist3h2bbQ8CGP0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hist3h2bbQ8CGP0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hist3h2bbQ8CGP0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hist3h2bbQ8CGP0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hist3h2bbQ8CGP0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hist3h2bbQ8CGP0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Hist3h2bbQ8CGP0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hist3h2bbQ8CGP0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Hist3h2bbQ8CGP0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hist3h2bbQ8CGP0 Gm23366-201ENSMUST00000175022 89 ntBASIC17.98■□□□□ 0.47
Hist3h2bbQ8CGP0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hist3h2bbQ8CGP0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hist3h2bbQ8CGP0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hist3h2bbQ8CGP0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hist3h2bbQ8CGP0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hist3h2bbQ8CGP0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Hist3h2bbQ8CGP0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hist3h2bbQ8CGP0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hist3h2bbQ8CGP0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hist3h2bbQ8CGP0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.95■□□□□ 0.46
Hist3h2bbQ8CGP0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hist3h2bbQ8CGP0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hist3h2bbQ8CGP0 Mipep-204ENSMUST00000225043 1548 ntBASIC17.95■□□□□ 0.46
Hist3h2bbQ8CGP0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hist3h2bbQ8CGP0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.95■□□□□ 0.46
Hist3h2bbQ8CGP0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hist3h2bbQ8CGP0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hist3h2bbQ8CGP0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hist3h2bbQ8CGP0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hist3h2bbQ8CGP0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hist3h2bbQ8CGP0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist3h2bbQ8CGP0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Hist3h2bbQ8CGP0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hist3h2bbQ8CGP0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hist3h2bbQ8CGP0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hist3h2bbQ8CGP0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hist3h2bbQ8CGP0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hist3h2bbQ8CGP0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hist3h2bbQ8CGP0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hist3h2bbQ8CGP0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Hist3h2bbQ8CGP0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hist3h2bbQ8CGP0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hist3h2bbQ8CGP0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hist3h2bbQ8CGP0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist3h2bbQ8CGP0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist3h2bbQ8CGP0 Gm27325-201ENSMUST00000175467 74 ntBASIC17.87■□□□□ 0.45
Hist3h2bbQ8CGP0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.87■□□□□ 0.45
Hist3h2bbQ8CGP0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist3h2bbQ8CGP0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms