Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SynpoQ8CC35 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SynpoQ8CC35 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SynpoQ8CC35 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SynpoQ8CC35 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SynpoQ8CC35 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.56■■□□□ 1.2
SynpoQ8CC35 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.56■■□□□ 1.2
SynpoQ8CC35 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
SynpoQ8CC35 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SynpoQ8CC35 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SynpoQ8CC35 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SynpoQ8CC35 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SynpoQ8CC35 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SynpoQ8CC35 Gm11599-201ENSMUST00000118720 878 ntBASIC22.53■■□□□ 1.2
SynpoQ8CC35 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.53■■□□□ 1.2
SynpoQ8CC35 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SynpoQ8CC35 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SynpoQ8CC35 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
SynpoQ8CC35 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SynpoQ8CC35 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SynpoQ8CC35 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
SynpoQ8CC35 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.51■■□□□ 1.19
SynpoQ8CC35 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SynpoQ8CC35 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.5■■□□□ 1.19
SynpoQ8CC35 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.5■■□□□ 1.19
SynpoQ8CC35 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.5■■□□□ 1.19
SynpoQ8CC35 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.49■■□□□ 1.19
SynpoQ8CC35 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SynpoQ8CC35 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.48■■□□□ 1.19
SynpoQ8CC35 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SynpoQ8CC35 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SynpoQ8CC35 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SynpoQ8CC35 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SynpoQ8CC35 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
SynpoQ8CC35 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SynpoQ8CC35 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
SynpoQ8CC35 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SynpoQ8CC35 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SynpoQ8CC35 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SynpoQ8CC35 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SynpoQ8CC35 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SynpoQ8CC35 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SynpoQ8CC35 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
SynpoQ8CC35 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SynpoQ8CC35 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.42■■□□□ 1.18
SynpoQ8CC35 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SynpoQ8CC35 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SynpoQ8CC35 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SynpoQ8CC35 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
SynpoQ8CC35 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
SynpoQ8CC35 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SynpoQ8CC35 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.41■■□□□ 1.18
SynpoQ8CC35 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SynpoQ8CC35 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SynpoQ8CC35 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.4■■□□□ 1.18
SynpoQ8CC35 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SynpoQ8CC35 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.4■■□□□ 1.18
SynpoQ8CC35 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SynpoQ8CC35 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.39■■□□□ 1.18
SynpoQ8CC35 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
SynpoQ8CC35 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SynpoQ8CC35 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SynpoQ8CC35 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SynpoQ8CC35 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SynpoQ8CC35 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SynpoQ8CC35 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SynpoQ8CC35 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SynpoQ8CC35 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SynpoQ8CC35 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SynpoQ8CC35 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
SynpoQ8CC35 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SynpoQ8CC35 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SynpoQ8CC35 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.37■■□□□ 1.17
SynpoQ8CC35 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SynpoQ8CC35 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SynpoQ8CC35 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SynpoQ8CC35 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SynpoQ8CC35 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SynpoQ8CC35 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SynpoQ8CC35 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SynpoQ8CC35 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
SynpoQ8CC35 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.35■■□□□ 1.17
SynpoQ8CC35 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SynpoQ8CC35 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
SynpoQ8CC35 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SynpoQ8CC35 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.33■■□□□ 1.17
SynpoQ8CC35 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
SynpoQ8CC35 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SynpoQ8CC35 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.33■■□□□ 1.16
SynpoQ8CC35 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SynpoQ8CC35 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SynpoQ8CC35 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SynpoQ8CC35 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SynpoQ8CC35 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.31■■□□□ 1.16
SynpoQ8CC35 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SynpoQ8CC35 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SynpoQ8CC35 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SynpoQ8CC35 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SynpoQ8CC35 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SynpoQ8CC35 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms