Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm4799-201ENSMUST00000095396 657 ntBASIC25.04■■□□□ 1.6
Nod1Q8BHB0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Nod1Q8BHB0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Nod1Q8BHB0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Nod1Q8BHB0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Nod1Q8BHB0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.03■■□□□ 1.6
Nod1Q8BHB0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Nod1Q8BHB0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Nod1Q8BHB0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Nod1Q8BHB0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.01■■□□□ 1.59
Nod1Q8BHB0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Nod1Q8BHB0 Gm11687-201ENSMUST00000118911 886 ntBASIC25.01■■□□□ 1.59
Nod1Q8BHB0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.01■■□□□ 1.59
Nod1Q8BHB0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Nod1Q8BHB0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Nod1Q8BHB0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25■■□□□ 1.59
Nod1Q8BHB0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25■■□□□ 1.59
Nod1Q8BHB0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.99■■□□□ 1.59
Nod1Q8BHB0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.99■■□□□ 1.59
Nod1Q8BHB0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Nod1Q8BHB0 Gm9806-201ENSMUST00000051080 552 ntBASIC24.99■■□□□ 1.59
Nod1Q8BHB0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Nod1Q8BHB0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Nod1Q8BHB0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Nod1Q8BHB0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Nod1Q8BHB0 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.97■■□□□ 1.59
Nod1Q8BHB0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Nod1Q8BHB0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Nod1Q8BHB0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Nod1Q8BHB0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Nod1Q8BHB0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Nod1Q8BHB0 Gm16437-201ENSMUST00000025669 507 ntBASIC24.95■■□□□ 1.58
Nod1Q8BHB0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Nod1Q8BHB0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
Nod1Q8BHB0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.94■■□□□ 1.58
Nod1Q8BHB0 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.94■■□□□ 1.58
Nod1Q8BHB0 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.94■■□□□ 1.58
Nod1Q8BHB0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.94■■□□□ 1.58
Nod1Q8BHB0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Nod1Q8BHB0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.93■■□□□ 1.58
Nod1Q8BHB0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Nod1Q8BHB0 Mir3960-201ENSMUST00000198213 73 ntBASIC24.93■■□□□ 1.58
Nod1Q8BHB0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Nod1Q8BHB0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nod1Q8BHB0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Nod1Q8BHB0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Nod1Q8BHB0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.9■■□□□ 1.58
Nod1Q8BHB0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.89■■□□□ 1.58
Nod1Q8BHB0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Nod1Q8BHB0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Nod1Q8BHB0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.87■■□□□ 1.57
Nod1Q8BHB0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Nod1Q8BHB0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Nod1Q8BHB0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Nod1Q8BHB0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Nod1Q8BHB0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Nod1Q8BHB0 Gm37136-201ENSMUST00000194368 194 ntBASIC24.86■■□□□ 1.57
Nod1Q8BHB0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.85■■□□□ 1.57
Nod1Q8BHB0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Nod1Q8BHB0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.85■■□□□ 1.57
Nod1Q8BHB0 Zxda-201ENSMUST00000117281 2621 ntBASIC24.85■■□□□ 1.57
Nod1Q8BHB0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Nod1Q8BHB0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Nod1Q8BHB0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Nod1Q8BHB0 Gm45364-201ENSMUST00000210883 159 ntBASIC24.83■■□□□ 1.57
Nod1Q8BHB0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Nod1Q8BHB0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Nod1Q8BHB0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.82■■□□□ 1.56
Nod1Q8BHB0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Nod1Q8BHB0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Gm12366-201ENSMUST00000121722 873 ntBASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Gm5786-201ENSMUST00000085368 882 ntBASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Nod1Q8BHB0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Nod1Q8BHB0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Nod1Q8BHB0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Nod1Q8BHB0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nod1Q8BHB0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nod1Q8BHB0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nod1Q8BHB0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nod1Q8BHB0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nod1Q8BHB0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nod1Q8BHB0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Nod1Q8BHB0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Nod1Q8BHB0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.76■■□□□ 1.55
Nod1Q8BHB0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.76■■□□□ 1.55
Nod1Q8BHB0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Nod1Q8BHB0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.75■■□□□ 1.55
Nod1Q8BHB0 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.75■■□□□ 1.55
Nod1Q8BHB0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Nod1Q8BHB0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.74■■□□□ 1.55
Nod1Q8BHB0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Nod1Q8BHB0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Nod1Q8BHB0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nod1Q8BHB0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Nod1Q8BHB0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms