Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Gm12366-201ENSMUST00000121722 873 ntBASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Gm5786-201ENSMUST00000085368 882 ntBASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Prpf40bQ80W14 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Prpf40bQ80W14 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.2■■□□□ 1.95
Prpf40bQ80W14 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Prpf40bQ80W14 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Prpf40bQ80W14 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Scarna2-201ENSMUST00000157560 414 ntBASIC27.18■■□□□ 1.94
Prpf40bQ80W14 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Prpf40bQ80W14 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Prpf40bQ80W14 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.17■■□□□ 1.94
Prpf40bQ80W14 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Prpf40bQ80W14 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Prpf40bQ80W14 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Prpf40bQ80W14 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Prpf40bQ80W14 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Prpf40bQ80W14 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Prpf40bQ80W14 Gm11687-201ENSMUST00000118911 886 ntBASIC27.12■■□□□ 1.93
Prpf40bQ80W14 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.12■■□□□ 1.93
Prpf40bQ80W14 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Prpf40bQ80W14 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.11■■□□□ 1.93
Prpf40bQ80W14 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Prpf40bQ80W14 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Prpf40bQ80W14 Particl-201ENSMUST00000205370 1560 ntBASIC27.09■■□□□ 1.93
Prpf40bQ80W14 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Gm9806-201ENSMUST00000051080 552 ntBASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Gm4799-201ENSMUST00000095396 657 ntBASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Prpf40bQ80W14 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Prpf40bQ80W14 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Prpf40bQ80W14 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Prpf40bQ80W14 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Prpf40bQ80W14 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Prpf40bQ80W14 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Prpf40bQ80W14 Gm16437-201ENSMUST00000025669 507 ntBASIC27.03■■□□□ 1.92
Prpf40bQ80W14 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf40bQ80W14 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Prpf40bQ80W14 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
Prpf40bQ80W14 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.01■■□□□ 1.92
Prpf40bQ80W14 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Prpf40bQ80W14 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Prpf40bQ80W14 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Prpf40bQ80W14 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Prpf40bQ80W14 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27■■□□□ 1.91
Prpf40bQ80W14 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27■■□□□ 1.91
Prpf40bQ80W14 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Prpf40bQ80W14 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.99■■□□□ 1.91
Prpf40bQ80W14 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
Prpf40bQ80W14 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.98■■□□□ 1.91
Prpf40bQ80W14 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Prpf40bQ80W14 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Prpf40bQ80W14 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.97■■□□□ 1.91
Prpf40bQ80W14 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Prpf40bQ80W14 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Prpf40bQ80W14 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Prpf40bQ80W14 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Prpf40bQ80W14 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Prpf40bQ80W14 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Gm7332-201ENSMUST00000118351 454 ntBASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Prpf40bQ80W14 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Prpf40bQ80W14 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.93■■□□□ 1.9
Prpf40bQ80W14 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Prpf40bQ80W14 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.92■■□□□ 1.9
Prpf40bQ80W14 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Prpf40bQ80W14 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Prpf40bQ80W14 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Prpf40bQ80W14 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.9■■□□□ 1.9
Prpf40bQ80W14 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms