Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Otub1Q7TQI3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Otub1Q7TQI3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Otub1Q7TQI3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
Otub1Q7TQI3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Otub1Q7TQI3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Otub1Q7TQI3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Otub1Q7TQI3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Otub1Q7TQI3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Otub1Q7TQI3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
Otub1Q7TQI3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Otub1Q7TQI3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Otub1Q7TQI3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Otub1Q7TQI3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
Otub1Q7TQI3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Otub1Q7TQI3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Otub1Q7TQI3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Otub1Q7TQI3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Otub1Q7TQI3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Otub1Q7TQI3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.17■■□□□ 1.14
Otub1Q7TQI3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Otub1Q7TQI3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Otub1Q7TQI3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Otub1Q7TQI3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Otub1Q7TQI3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Otub1Q7TQI3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Otub1Q7TQI3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Otub1Q7TQI3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.15■■□□□ 1.14
Otub1Q7TQI3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Otub1Q7TQI3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Otub1Q7TQI3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.14■■□□□ 1.13
Otub1Q7TQI3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Otub1Q7TQI3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Otub1Q7TQI3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Otub1Q7TQI3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Otub1Q7TQI3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Otub1Q7TQI3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Otub1Q7TQI3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Otub1Q7TQI3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Otub1Q7TQI3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Otub1Q7TQI3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Otub1Q7TQI3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Otub1Q7TQI3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.11■■□□□ 1.13
Otub1Q7TQI3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Otub1Q7TQI3 Gm30023-201ENSMUST00000197970 889 ntBASIC22.11■■□□□ 1.13
Otub1Q7TQI3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.11■■□□□ 1.13
Otub1Q7TQI3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Otub1Q7TQI3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Otub1Q7TQI3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Otub1Q7TQI3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Otub1Q7TQI3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Otub1Q7TQI3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Otub1Q7TQI3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.09■■□□□ 1.13
Otub1Q7TQI3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.09■■□□□ 1.13
Otub1Q7TQI3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Otub1Q7TQI3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Otub1Q7TQI3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Otub1Q7TQI3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Otub1Q7TQI3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Otub1Q7TQI3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Otub1Q7TQI3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Otub1Q7TQI3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Otub1Q7TQI3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Otub1Q7TQI3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Otub1Q7TQI3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Otub1Q7TQI3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Otub1Q7TQI3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.06■■□□□ 1.12
Otub1Q7TQI3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Otub1Q7TQI3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Otub1Q7TQI3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Otub1Q7TQI3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Otub1Q7TQI3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Otub1Q7TQI3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Otub1Q7TQI3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.04■■□□□ 1.12
Otub1Q7TQI3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Otub1Q7TQI3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Otub1Q7TQI3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.03■■□□□ 1.12
Otub1Q7TQI3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Otub1Q7TQI3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Otub1Q7TQI3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Otub1Q7TQI3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Otub1Q7TQI3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Otub1Q7TQI3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Otub1Q7TQI3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22■■□□□ 1.11
Otub1Q7TQI3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22■■□□□ 1.11
Otub1Q7TQI3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Otub1Q7TQI3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22■■□□□ 1.11
Otub1Q7TQI3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22■■□□□ 1.11
Otub1Q7TQI3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Otub1Q7TQI3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22■■□□□ 1.11
Otub1Q7TQI3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Otub1Q7TQI3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Otub1Q7TQI3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Otub1Q7TQI3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Otub1Q7TQI3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Otub1Q7TQI3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Otub1Q7TQI3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.98■■□□□ 1.11
Otub1Q7TQI3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.98■■□□□ 1.11
Otub1Q7TQI3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Otub1Q7TQI3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms