Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Scarna2-201ENSMUST00000157560 414 ntBASIC34.82■■■■□ 3.17
ShprhQ7TPQ3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
ShprhQ7TPQ3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ShprhQ7TPQ3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ShprhQ7TPQ3 Pkd1-207ENSMUST00000228550 1050 ntBASIC34.81■■■■□ 3.16
ShprhQ7TPQ3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ShprhQ7TPQ3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ShprhQ7TPQ3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC34.8■■■■□ 3.16
ShprhQ7TPQ3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC34.8■■■■□ 3.16
ShprhQ7TPQ3 AC154454.1-201ENSMUST00000225253 216 ntBASIC34.79■■■■□ 3.16
ShprhQ7TPQ3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC34.79■■■■□ 3.16
ShprhQ7TPQ3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
ShprhQ7TPQ3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
ShprhQ7TPQ3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
ShprhQ7TPQ3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
ShprhQ7TPQ3 Gm9806-201ENSMUST00000051080 552 ntBASIC34.77■■■■□ 3.16
ShprhQ7TPQ3 Gm4799-201ENSMUST00000095396 657 ntBASIC34.77■■■■□ 3.16
ShprhQ7TPQ3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC34.76■■■■□ 3.16
ShprhQ7TPQ3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC34.76■■■■□ 3.16
ShprhQ7TPQ3 Gm37136-201ENSMUST00000194368 194 ntBASIC34.76■■■■□ 3.16
ShprhQ7TPQ3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
ShprhQ7TPQ3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
ShprhQ7TPQ3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
ShprhQ7TPQ3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
ShprhQ7TPQ3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC34.73■■■■□ 3.15
ShprhQ7TPQ3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC34.73■■■■□ 3.15
ShprhQ7TPQ3 Gm12366-201ENSMUST00000121722 873 ntBASIC34.73■■■■□ 3.15
ShprhQ7TPQ3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC34.73■■■■□ 3.15
ShprhQ7TPQ3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC34.73■■■■□ 3.15
ShprhQ7TPQ3 Gm5786-201ENSMUST00000085368 882 ntBASIC34.73■■■■□ 3.15
ShprhQ7TPQ3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
ShprhQ7TPQ3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC34.72■■■■□ 3.15
ShprhQ7TPQ3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
ShprhQ7TPQ3 Gm11687-201ENSMUST00000118911 886 ntBASIC34.72■■■■□ 3.15
ShprhQ7TPQ3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
ShprhQ7TPQ3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
ShprhQ7TPQ3 Gm9905-201ENSMUST00000065740 1845 ntBASIC34.71■■■■□ 3.15
ShprhQ7TPQ3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
ShprhQ7TPQ3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC34.7■■■■□ 3.15
ShprhQ7TPQ3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
ShprhQ7TPQ3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
ShprhQ7TPQ3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC34.7■■■■□ 3.14
ShprhQ7TPQ3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
ShprhQ7TPQ3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC34.68■■■■□ 3.14
ShprhQ7TPQ3 Mir3960-201ENSMUST00000198213 73 ntBASIC34.68■■■■□ 3.14
ShprhQ7TPQ3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC34.68■■■■□ 3.14
ShprhQ7TPQ3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
ShprhQ7TPQ3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
ShprhQ7TPQ3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC34.66■■■■□ 3.14
ShprhQ7TPQ3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC34.66■■■■□ 3.14
ShprhQ7TPQ3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
ShprhQ7TPQ3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
ShprhQ7TPQ3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC34.64■■■■□ 3.14
ShprhQ7TPQ3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.14
ShprhQ7TPQ3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
ShprhQ7TPQ3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
ShprhQ7TPQ3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC34.61■■■■□ 3.13
ShprhQ7TPQ3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
ShprhQ7TPQ3 Gm27502-201ENSMUST00000183495 199 ntBASIC34.59■■■■□ 3.13
ShprhQ7TPQ3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
ShprhQ7TPQ3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
ShprhQ7TPQ3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
ShprhQ7TPQ3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
ShprhQ7TPQ3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
ShprhQ7TPQ3 Gm16437-201ENSMUST00000025669 507 ntBASIC34.56■■■■□ 3.12
ShprhQ7TPQ3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
ShprhQ7TPQ3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
ShprhQ7TPQ3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
ShprhQ7TPQ3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC34.51■■■■□ 3.11
ShprhQ7TPQ3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC34.5■■■■□ 3.11
ShprhQ7TPQ3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
ShprhQ7TPQ3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC34.49■■■■□ 3.11
ShprhQ7TPQ3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
ShprhQ7TPQ3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
ShprhQ7TPQ3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
ShprhQ7TPQ3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC34.46■■■■□ 3.11
ShprhQ7TPQ3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
ShprhQ7TPQ3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
ShprhQ7TPQ3 AC151971.4-201ENSMUST00000214717 704 ntBASIC34.46■■■■□ 3.11
ShprhQ7TPQ3 Gm13889-201ENSMUST00000099689 1386 ntBASIC34.46■■■■□ 3.11
ShprhQ7TPQ3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC34.45■■■■□ 3.11
ShprhQ7TPQ3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC34.45■■■■□ 3.11
ShprhQ7TPQ3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ShprhQ7TPQ3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC34.44■■■■□ 3.1
ShprhQ7TPQ3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC34.43■■■■□ 3.1
ShprhQ7TPQ3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
ShprhQ7TPQ3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC34.42■■■■□ 3.1
ShprhQ7TPQ3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC34.42■■■■□ 3.1
ShprhQ7TPQ3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC34.41■■■■□ 3.1
ShprhQ7TPQ3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
ShprhQ7TPQ3 Gm12818-201ENSMUST00000117562 1349 ntBASIC34.41■■■■□ 3.1
ShprhQ7TPQ3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC34.39■■■■□ 3.1
ShprhQ7TPQ3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ShprhQ7TPQ3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC34.38■■■■□ 3.09
ShprhQ7TPQ3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC34.38■■■■□ 3.09
ShprhQ7TPQ3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
ShprhQ7TPQ3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ShprhQ7TPQ3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC34.37■■■■□ 3.09
ShprhQ7TPQ3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ShprhQ7TPQ3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms