Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Cspg5Q71M36 Particl-201ENSMUST00000205370 1560 ntBASIC24.27■■□□□ 1.48
Cspg5Q71M36 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Cspg5Q71M36 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Cspg5Q71M36 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cspg5Q71M36 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.26■■□□□ 1.47
Cspg5Q71M36 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cspg5Q71M36 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Cspg5Q71M36 Scarna2-201ENSMUST00000157560 414 ntBASIC24.23■■□□□ 1.47
Cspg5Q71M36 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cspg5Q71M36 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Cspg5Q71M36 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cspg5Q71M36 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Cspg5Q71M36 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cspg5Q71M36 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Cspg5Q71M36 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Cspg5Q71M36 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cspg5Q71M36 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cspg5Q71M36 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.19■■□□□ 1.46
Cspg5Q71M36 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.19■■□□□ 1.46
Cspg5Q71M36 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cspg5Q71M36 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cspg5Q71M36 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Cspg5Q71M36 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cspg5Q71M36 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.18■■□□□ 1.46
Cspg5Q71M36 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cspg5Q71M36 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cspg5Q71M36 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cspg5Q71M36 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cspg5Q71M36 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
Cspg5Q71M36 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cspg5Q71M36 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Cspg5Q71M36 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Cspg5Q71M36 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Cspg5Q71M36 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.15■■□□□ 1.46
Cspg5Q71M36 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cspg5Q71M36 Gm11687-201ENSMUST00000118911 886 ntBASIC24.15■■□□□ 1.46
Cspg5Q71M36 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Cspg5Q71M36 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Cspg5Q71M36 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cspg5Q71M36 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cspg5Q71M36 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cspg5Q71M36 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Cspg5Q71M36 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cspg5Q71M36 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Cspg5Q71M36 Gm16437-201ENSMUST00000025669 507 ntBASIC24.11■■□□□ 1.45
Cspg5Q71M36 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Cspg5Q71M36 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cspg5Q71M36 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.1■■□□□ 1.45
Cspg5Q71M36 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cspg5Q71M36 Gm4799-201ENSMUST00000095396 657 ntBASIC24.1■■□□□ 1.45
Cspg5Q71M36 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cspg5Q71M36 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Cspg5Q71M36 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Cspg5Q71M36 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cspg5Q71M36 Gm9806-201ENSMUST00000051080 552 ntBASIC24.09■■□□□ 1.45
Cspg5Q71M36 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cspg5Q71M36 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Cspg5Q71M36 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cspg5Q71M36 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.07■■□□□ 1.44
Cspg5Q71M36 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Cspg5Q71M36 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.07■■□□□ 1.44
Cspg5Q71M36 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cspg5Q71M36 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cspg5Q71M36 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cspg5Q71M36 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cspg5Q71M36 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Cspg5Q71M36 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cspg5Q71M36 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Cspg5Q71M36 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cspg5Q71M36 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cspg5Q71M36 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cspg5Q71M36 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Cspg5Q71M36 Gm27502-201ENSMUST00000183495 199 ntBASIC24.02■■□□□ 1.44
Cspg5Q71M36 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cspg5Q71M36 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cspg5Q71M36 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Cspg5Q71M36 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cspg5Q71M36 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cspg5Q71M36 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cspg5Q71M36 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cspg5Q71M36 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24■■□□□ 1.43
Cspg5Q71M36 Gm12366-201ENSMUST00000121722 873 ntBASIC24■■□□□ 1.43
Cspg5Q71M36 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24■■□□□ 1.43
Cspg5Q71M36 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cspg5Q71M36 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cspg5Q71M36 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24■■□□□ 1.43
Cspg5Q71M36 Gm5786-201ENSMUST00000085368 882 ntBASIC24■■□□□ 1.43
Cspg5Q71M36 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Cspg5Q71M36 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cspg5Q71M36 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.99■■□□□ 1.43
Cspg5Q71M36 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Cspg5Q71M36 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cspg5Q71M36 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cspg5Q71M36 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.98■■□□□ 1.43
Cspg5Q71M36 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cspg5Q71M36 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cspg5Q71M36 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cspg5Q71M36 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.96■■□□□ 1.43
Cspg5Q71M36 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms