Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim37Q6PCX9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.13■■□□□ 1.77
Trim37Q6PCX9 Gm12366-201ENSMUST00000121722 873 ntBASIC26.13■■□□□ 1.77
Trim37Q6PCX9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.13■■□□□ 1.77
Trim37Q6PCX9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.13■■□□□ 1.77
Trim37Q6PCX9 Gm5786-201ENSMUST00000085368 882 ntBASIC26.13■■□□□ 1.77
Trim37Q6PCX9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Trim37Q6PCX9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Trim37Q6PCX9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim37Q6PCX9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim37Q6PCX9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.11■■□□□ 1.77
Trim37Q6PCX9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trim37Q6PCX9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trim37Q6PCX9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Trim37Q6PCX9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Trim37Q6PCX9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.09■■□□□ 1.77
Trim37Q6PCX9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim37Q6PCX9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
Trim37Q6PCX9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Trim37Q6PCX9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.08■■□□□ 1.77
Trim37Q6PCX9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim37Q6PCX9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Trim37Q6PCX9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Trim37Q6PCX9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.07■■□□□ 1.76
Trim37Q6PCX9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.06■■□□□ 1.76
Trim37Q6PCX9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Trim37Q6PCX9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim37Q6PCX9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim37Q6PCX9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim37Q6PCX9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.05■■□□□ 1.76
Trim37Q6PCX9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim37Q6PCX9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim37Q6PCX9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim37Q6PCX9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.03■■□□□ 1.76
Trim37Q6PCX9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.03■■□□□ 1.76
Trim37Q6PCX9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim37Q6PCX9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Trim37Q6PCX9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trim37Q6PCX9 Scarna2-201ENSMUST00000157560 414 ntBASIC26.01■■□□□ 1.75
Trim37Q6PCX9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trim37Q6PCX9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim37Q6PCX9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26■■□□□ 1.75
Trim37Q6PCX9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26■■□□□ 1.75
Trim37Q6PCX9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26■■□□□ 1.75
Trim37Q6PCX9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
Trim37Q6PCX9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim37Q6PCX9 Gm22567-201ENSMUST00000175542 342 ntBASIC25.99■■□□□ 1.75
Trim37Q6PCX9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trim37Q6PCX9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim37Q6PCX9 Gm11687-201ENSMUST00000118911 886 ntBASIC25.98■■□□□ 1.75
Trim37Q6PCX9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim37Q6PCX9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim37Q6PCX9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Trim37Q6PCX9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trim37Q6PCX9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim37Q6PCX9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trim37Q6PCX9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trim37Q6PCX9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.95■■□□□ 1.74
Trim37Q6PCX9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim37Q6PCX9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trim37Q6PCX9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.94■■□□□ 1.74
Trim37Q6PCX9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim37Q6PCX9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim37Q6PCX9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim37Q6PCX9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim37Q6PCX9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
Trim37Q6PCX9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim37Q6PCX9 Gm4799-201ENSMUST00000095396 657 ntBASIC25.92■■□□□ 1.74
Trim37Q6PCX9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim37Q6PCX9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.91■■□□□ 1.74
Trim37Q6PCX9 Gm9806-201ENSMUST00000051080 552 ntBASIC25.91■■□□□ 1.74
Trim37Q6PCX9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trim37Q6PCX9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trim37Q6PCX9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trim37Q6PCX9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trim37Q6PCX9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim37Q6PCX9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trim37Q6PCX9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim37Q6PCX9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim37Q6PCX9 Gm7332-201ENSMUST00000118351 454 ntBASIC25.87■■□□□ 1.73
Trim37Q6PCX9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim37Q6PCX9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim37Q6PCX9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim37Q6PCX9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim37Q6PCX9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Trim37Q6PCX9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim37Q6PCX9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Trim37Q6PCX9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim37Q6PCX9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Trim37Q6PCX9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Trim37Q6PCX9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Trim37Q6PCX9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Trim37Q6PCX9 Gm16437-201ENSMUST00000025669 507 ntBASIC25.84■■□□□ 1.73
Trim37Q6PCX9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Trim37Q6PCX9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim37Q6PCX9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.82■■□□□ 1.72
Trim37Q6PCX9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim37Q6PCX9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim37Q6PCX9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trim37Q6PCX9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms