Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ecm1Q61508 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ecm1Q61508 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ecm1Q61508 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.84■■□□□ 1.89
Ecm1Q61508 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ecm1Q61508 Gm4799-201ENSMUST00000095396 657 ntBASIC26.84■■□□□ 1.89
Ecm1Q61508 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.83■■□□□ 1.89
Ecm1Q61508 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ecm1Q61508 Gm9806-201ENSMUST00000051080 552 ntBASIC26.83■■□□□ 1.89
Ecm1Q61508 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Ecm1Q61508 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ecm1Q61508 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.81■■□□□ 1.88
Ecm1Q61508 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ecm1Q61508 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.81■■□□□ 1.88
Ecm1Q61508 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ecm1Q61508 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.81■■□□□ 1.88
Ecm1Q61508 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ecm1Q61508 Gm11687-201ENSMUST00000118911 886 ntBASIC26.8■■□□□ 1.88
Ecm1Q61508 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.8■■□□□ 1.88
Ecm1Q61508 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.8■■□□□ 1.88
Ecm1Q61508 Gm37136-201ENSMUST00000194368 194 ntBASIC26.79■■□□□ 1.88
Ecm1Q61508 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ecm1Q61508 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.78■■□□□ 1.88
Ecm1Q61508 Mir3960-201ENSMUST00000198213 73 ntBASIC26.78■■□□□ 1.88
Ecm1Q61508 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ecm1Q61508 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.77■■□□□ 1.88
Ecm1Q61508 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Ecm1Q61508 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ecm1Q61508 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ecm1Q61508 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ecm1Q61508 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Ecm1Q61508 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.75■■□□□ 1.87
Ecm1Q61508 Gm16437-201ENSMUST00000025669 507 ntBASIC26.75■■□□□ 1.87
Ecm1Q61508 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ecm1Q61508 Gm45364-201ENSMUST00000210883 159 ntBASIC26.74■■□□□ 1.87
Ecm1Q61508 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.74■■□□□ 1.87
Ecm1Q61508 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ecm1Q61508 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.73■■□□□ 1.87
Ecm1Q61508 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.72■■□□□ 1.87
Ecm1Q61508 Gm12366-201ENSMUST00000121722 873 ntBASIC26.72■■□□□ 1.87
Ecm1Q61508 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.72■■□□□ 1.87
Ecm1Q61508 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.72■■□□□ 1.87
Ecm1Q61508 Gm5786-201ENSMUST00000085368 882 ntBASIC26.72■■□□□ 1.87
Ecm1Q61508 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ecm1Q61508 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
Ecm1Q61508 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ecm1Q61508 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Ecm1Q61508 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ecm1Q61508 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.69■■□□□ 1.86
Ecm1Q61508 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ecm1Q61508 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ecm1Q61508 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ecm1Q61508 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.68■■□□□ 1.86
Ecm1Q61508 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ecm1Q61508 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ecm1Q61508 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ecm1Q61508 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ecm1Q61508 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ecm1Q61508 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Ecm1Q61508 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.66■■□□□ 1.86
Ecm1Q61508 Zxda-201ENSMUST00000117281 2621 ntBASIC26.65■■□□□ 1.86
Ecm1Q61508 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.65■■□□□ 1.86
Ecm1Q61508 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ecm1Q61508 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ecm1Q61508 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ecm1Q61508 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ecm1Q61508 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Ecm1Q61508 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ecm1Q61508 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.62■■□□□ 1.85
Ecm1Q61508 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ecm1Q61508 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ecm1Q61508 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ecm1Q61508 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ecm1Q61508 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.59■■□□□ 1.85
Ecm1Q61508 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.59■■□□□ 1.85
Ecm1Q61508 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ecm1Q61508 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Ecm1Q61508 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ecm1Q61508 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ecm1Q61508 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ecm1Q61508 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ecm1Q61508 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.56■■□□□ 1.84
Ecm1Q61508 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ecm1Q61508 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.55■■□□□ 1.84
Ecm1Q61508 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.55■■□□□ 1.84
Ecm1Q61508 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.55■■□□□ 1.84
Ecm1Q61508 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ecm1Q61508 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ecm1Q61508 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ecm1Q61508 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
Ecm1Q61508 Gm27502-201ENSMUST00000183495 199 ntBASIC26.53■■□□□ 1.84
Ecm1Q61508 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ecm1Q61508 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
Ecm1Q61508 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ecm1Q61508 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ecm1Q61508 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ecm1Q61508 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ecm1Q61508 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ecm1Q61508 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ecm1Q61508 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms