Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Scaf1Q5U4C3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31,71■■■□□ 2,67
Scaf1Q5U4C3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31,71■■■□□ 2,67
Scaf1Q5U4C3 Zxda-201ENSMUST00000117281 2621 ntBASIC31,69■■■□□ 2,66
Scaf1Q5U4C3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31,69■■■□□ 2,66
Scaf1Q5U4C3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31,68■■■□□ 2,66
Scaf1Q5U4C3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Scaf1Q5U4C3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Scaf1Q5U4C3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31,68■■■□□ 2,66
Scaf1Q5U4C3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Scaf1Q5U4C3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Scaf1Q5U4C3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31,66■■■□□ 2,66
Scaf1Q5U4C3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31,66■■■□□ 2,66
Scaf1Q5U4C3 Cap2-205ENSMUST00000225824 1634 ntBASIC31,65■■■□□ 2,66
Scaf1Q5U4C3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31,65■■■□□ 2,66
Scaf1Q5U4C3 Gm4799-201ENSMUST00000095396 657 ntBASIC31,64■■■□□ 2,66
Scaf1Q5U4C3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Scaf1Q5U4C3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Scaf1Q5U4C3 Mir3960-201ENSMUST00000198213 73 ntBASIC31,62■■■□□ 2,65
Scaf1Q5U4C3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31,62■■■□□ 2,65
Scaf1Q5U4C3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31,62■■■□□ 2,65
Scaf1Q5U4C3 Gm13889-201ENSMUST00000099689 1386 ntBASIC31,62■■■□□ 2,65
Scaf1Q5U4C3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31,61■■■□□ 2,65
Scaf1Q5U4C3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31,61■■■□□ 2,65
Scaf1Q5U4C3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31,6■■■□□ 2,65
Scaf1Q5U4C3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31,6■■■□□ 2,65
Scaf1Q5U4C3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31,6■■■□□ 2,65
Scaf1Q5U4C3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31,58■■■□□ 2,65
Scaf1Q5U4C3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31,57■■■□□ 2,64
Scaf1Q5U4C3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31,57■■■□□ 2,64
Scaf1Q5U4C3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31,56■■■□□ 2,64
Scaf1Q5U4C3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31,56■■■□□ 2,64
Scaf1Q5U4C3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31,56■■■□□ 2,64
Scaf1Q5U4C3 Pkd1-207ENSMUST00000228550 1050 ntBASIC31,55■■■□□ 2,64
Scaf1Q5U4C3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Scaf1Q5U4C3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31,54■■■□□ 2,64
Scaf1Q5U4C3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31,53■■■□□ 2,64
Scaf1Q5U4C3 Gm12818-201ENSMUST00000117562 1349 ntBASIC31,52■■■□□ 2,64
Scaf1Q5U4C3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC31,52■■■□□ 2,64
Scaf1Q5U4C3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31,51■■■□□ 2,63
Scaf1Q5U4C3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC31,51■■■□□ 2,63
Scaf1Q5U4C3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31,51■■■□□ 2,63
Scaf1Q5U4C3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31,51■■■□□ 2,63
Scaf1Q5U4C3 Gm45364-201ENSMUST00000210883 159 ntBASIC31,49■■■□□ 2,63
Scaf1Q5U4C3 Gm9806-201ENSMUST00000051080 552 ntBASIC31,48■■■□□ 2,63
Scaf1Q5U4C3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31,47■■■□□ 2,63
Scaf1Q5U4C3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31,46■■■□□ 2,63
Scaf1Q5U4C3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31,45■■■□□ 2,63
Scaf1Q5U4C3 Scarna2-201ENSMUST00000157560 414 ntBASIC31,44■■■□□ 2,62
Scaf1Q5U4C3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
Scaf1Q5U4C3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31,44■■■□□ 2,62
Scaf1Q5U4C3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31,44■■■□□ 2,62
Scaf1Q5U4C3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31,43■■■□□ 2,62
Scaf1Q5U4C3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31,43■■■□□ 2,62
Scaf1Q5U4C3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31,43■■■□□ 2,62
Scaf1Q5U4C3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31,43■■■□□ 2,62
Scaf1Q5U4C3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
Scaf1Q5U4C3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
Scaf1Q5U4C3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
Scaf1Q5U4C3 Gm9812-201ENSMUST00000061934 968 ntBASIC31,42■■■□□ 2,62
Scaf1Q5U4C3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Gm11687-201ENSMUST00000118911 886 ntBASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31,41■■■□□ 2,62
Scaf1Q5U4C3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31,4■■■□□ 2,62
Scaf1Q5U4C3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31,4■■■□□ 2,62
Scaf1Q5U4C3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31,39■■■□□ 2,62
Scaf1Q5U4C3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31,39■■■□□ 2,62
Scaf1Q5U4C3 Gm43445-201ENSMUST00000198564 2091 ntBASIC31,38■■■□□ 2,61
Scaf1Q5U4C3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31,38■■■□□ 2,61
Scaf1Q5U4C3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Scaf1Q5U4C3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31,37■■■□□ 2,61
Scaf1Q5U4C3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Scaf1Q5U4C3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31,36■■■□□ 2,61
Scaf1Q5U4C3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31,36■■■□□ 2,61
Scaf1Q5U4C3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31,35■■■□□ 2,61
Scaf1Q5U4C3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC31,35■■■□□ 2,61
Scaf1Q5U4C3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31,35■■■□□ 2,61
Scaf1Q5U4C3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31,33■■■□□ 2,61
Scaf1Q5U4C3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC31,32■■■□□ 2,61
Scaf1Q5U4C3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31,32■■■□□ 2,6
Scaf1Q5U4C3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC31,31■■■□□ 2,6
Scaf1Q5U4C3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC31,31■■■□□ 2,6
Scaf1Q5U4C3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31,31■■■□□ 2,6
Scaf1Q5U4C3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Scaf1Q5U4C3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC31,3■■■□□ 2,6
Scaf1Q5U4C3 Gm12366-201ENSMUST00000121722 873 ntBASIC31,3■■■□□ 2,6
Scaf1Q5U4C3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC31,3■■■□□ 2,6
Scaf1Q5U4C3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC31,3■■■□□ 2,6
Scaf1Q5U4C3 Gm5786-201ENSMUST00000085368 882 ntBASIC31,3■■■□□ 2,6
Scaf1Q5U4C3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31,28■■■□□ 2,6
Scaf1Q5U4C3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31,28■■■□□ 2,6
Scaf1Q5U4C3 Gm16437-201ENSMUST00000025669 507 ntBASIC31,27■■■□□ 2,6
Scaf1Q5U4C3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Scaf1Q5U4C3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms