Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trav6-2Q5R1I4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.96■□□□□ 0.95
Trav6-2Q5R1I4 Zxda-201ENSMUST00000117281 2621 ntBASIC20.95■□□□□ 0.94
Trav6-2Q5R1I4 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.95■□□□□ 0.94
Trav6-2Q5R1I4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav6-2Q5R1I4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav6-2Q5R1I4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav6-2Q5R1I4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav6-2Q5R1I4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav6-2Q5R1I4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav6-2Q5R1I4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.93■□□□□ 0.94
Trav6-2Q5R1I4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav6-2Q5R1I4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.92■□□□□ 0.94
Trav6-2Q5R1I4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav6-2Q5R1I4 Scarna2-201ENSMUST00000157560 414 ntBASIC20.91■□□□□ 0.94
Trav6-2Q5R1I4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav6-2Q5R1I4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav6-2Q5R1I4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.9■□□□□ 0.94
Trav6-2Q5R1I4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trav6-2Q5R1I4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav6-2Q5R1I4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav6-2Q5R1I4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trav6-2Q5R1I4 Gm11687-201ENSMUST00000118911 886 ntBASIC20.89■□□□□ 0.93
Trav6-2Q5R1I4 Mir3960-201ENSMUST00000198213 73 ntBASIC20.89■□□□□ 0.93
Trav6-2Q5R1I4 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.89■□□□□ 0.93
Trav6-2Q5R1I4 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.89■□□□□ 0.93
Trav6-2Q5R1I4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav6-2Q5R1I4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.88■□□□□ 0.93
Trav6-2Q5R1I4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Trav6-2Q5R1I4 Gm37136-201ENSMUST00000194368 194 ntBASIC20.87■□□□□ 0.93
Trav6-2Q5R1I4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.87■□□□□ 0.93
Trav6-2Q5R1I4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6-2Q5R1I4 Gm9806-201ENSMUST00000051080 552 ntBASIC20.87■□□□□ 0.93
Trav6-2Q5R1I4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.87■□□□□ 0.93
Trav6-2Q5R1I4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav6-2Q5R1I4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.85■□□□□ 0.93
Trav6-2Q5R1I4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6-2Q5R1I4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6-2Q5R1I4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6-2Q5R1I4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav6-2Q5R1I4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav6-2Q5R1I4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trav6-2Q5R1I4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Trav6-2Q5R1I4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav6-2Q5R1I4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Trav6-2Q5R1I4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav6-2Q5R1I4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav6-2Q5R1I4 Gm16437-201ENSMUST00000025669 507 ntBASIC20.82■□□□□ 0.92
Trav6-2Q5R1I4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav6-2Q5R1I4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav6-2Q5R1I4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.81■□□□□ 0.92
Trav6-2Q5R1I4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav6-2Q5R1I4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6-2Q5R1I4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6-2Q5R1I4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6-2Q5R1I4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6-2Q5R1I4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6-2Q5R1I4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6-2Q5R1I4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Trav6-2Q5R1I4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav6-2Q5R1I4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.77■□□□□ 0.92
Trav6-2Q5R1I4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trav6-2Q5R1I4 Gm45364-201ENSMUST00000210883 159 ntBASIC20.77■□□□□ 0.92
Trav6-2Q5R1I4 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.77■□□□□ 0.92
Trav6-2Q5R1I4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trav6-2Q5R1I4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6-2Q5R1I4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6-2Q5R1I4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6-2Q5R1I4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6-2Q5R1I4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav6-2Q5R1I4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Trav6-2Q5R1I4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6-2Q5R1I4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trav6-2Q5R1I4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6-2Q5R1I4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6-2Q5R1I4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6-2Q5R1I4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav6-2Q5R1I4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav6-2Q5R1I4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trav6-2Q5R1I4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.73■□□□□ 0.91
Trav6-2Q5R1I4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav6-2Q5R1I4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav6-2Q5R1I4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.72■□□□□ 0.91
Trav6-2Q5R1I4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.71■□□□□ 0.91
Trav6-2Q5R1I4 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.71■□□□□ 0.91
Trav6-2Q5R1I4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav6-2Q5R1I4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.7■□□□□ 0.9
Trav6-2Q5R1I4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.69■□□□□ 0.9
Trav6-2Q5R1I4 Gm12366-201ENSMUST00000121722 873 ntBASIC20.69■□□□□ 0.9
Trav6-2Q5R1I4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.69■□□□□ 0.9
Trav6-2Q5R1I4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6-2Q5R1I4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.69■□□□□ 0.9
Trav6-2Q5R1I4 Gm5786-201ENSMUST00000085368 882 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms