Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rnf43Q5NCP0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.23■■□□□ 1.47
Rnf43Q5NCP0 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.23■■□□□ 1.47
Rnf43Q5NCP0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Gm11687-201ENSMUST00000118911 886 ntBASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Gm12366-201ENSMUST00000121722 873 ntBASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Gm5786-201ENSMUST00000085368 882 ntBASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf43Q5NCP0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf43Q5NCP0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.21■■□□□ 1.47
Rnf43Q5NCP0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rnf43Q5NCP0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.2■■□□□ 1.46
Rnf43Q5NCP0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf43Q5NCP0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf43Q5NCP0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf43Q5NCP0 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.19■■□□□ 1.46
Rnf43Q5NCP0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf43Q5NCP0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf43Q5NCP0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnf43Q5NCP0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rnf43Q5NCP0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf43Q5NCP0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.17■■□□□ 1.46
Rnf43Q5NCP0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf43Q5NCP0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.17■■□□□ 1.46
Rnf43Q5NCP0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf43Q5NCP0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.16■■□□□ 1.46
Rnf43Q5NCP0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf43Q5NCP0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf43Q5NCP0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf43Q5NCP0 Gm4799-201ENSMUST00000095396 657 ntBASIC24.15■■□□□ 1.46
Rnf43Q5NCP0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf43Q5NCP0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rnf43Q5NCP0 Mir3960-201ENSMUST00000198213 73 ntBASIC24.14■■□□□ 1.45
Rnf43Q5NCP0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf43Q5NCP0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf43Q5NCP0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf43Q5NCP0 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.12■■□□□ 1.45
Rnf43Q5NCP0 Gm16437-201ENSMUST00000025669 507 ntBASIC24.12■■□□□ 1.45
Rnf43Q5NCP0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf43Q5NCP0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf43Q5NCP0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf43Q5NCP0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf43Q5NCP0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf43Q5NCP0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf43Q5NCP0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf43Q5NCP0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf43Q5NCP0 Gm37136-201ENSMUST00000194368 194 ntBASIC24.1■■□□□ 1.45
Rnf43Q5NCP0 Gm45364-201ENSMUST00000210883 159 ntBASIC24.1■■□□□ 1.45
Rnf43Q5NCP0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf43Q5NCP0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.1■■□□□ 1.45
Rnf43Q5NCP0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf43Q5NCP0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf43Q5NCP0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf43Q5NCP0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf43Q5NCP0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf43Q5NCP0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf43Q5NCP0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf43Q5NCP0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Rnf43Q5NCP0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
Rnf43Q5NCP0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf43Q5NCP0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.06■■□□□ 1.44
Rnf43Q5NCP0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf43Q5NCP0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf43Q5NCP0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf43Q5NCP0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf43Q5NCP0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf43Q5NCP0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.03■■□□□ 1.44
Rnf43Q5NCP0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf43Q5NCP0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf43Q5NCP0 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.03■■□□□ 1.44
Rnf43Q5NCP0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf43Q5NCP0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.02■■□□□ 1.44
Rnf43Q5NCP0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf43Q5NCP0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf43Q5NCP0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.01■■□□□ 1.43
Rnf43Q5NCP0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf43Q5NCP0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24■■□□□ 1.43
Rnf43Q5NCP0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf43Q5NCP0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf43Q5NCP0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf43Q5NCP0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf43Q5NCP0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf43Q5NCP0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf43Q5NCP0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.98■■□□□ 1.43
Rnf43Q5NCP0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf43Q5NCP0 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.97■■□□□ 1.43
Rnf43Q5NCP0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rnf43Q5NCP0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Rnf43Q5NCP0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rnf43Q5NCP0 Gm7332-201ENSMUST00000118351 454 ntBASIC23.96■■□□□ 1.43
Rnf43Q5NCP0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf43Q5NCP0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf43Q5NCP0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Rnf43Q5NCP0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Rnf43Q5NCP0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf43Q5NCP0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms