Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm12253Q5NC48 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm12253Q5NC48 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.43■□□□□ 0.86
Gm12253Q5NC48 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.43■□□□□ 0.86
Gm12253Q5NC48 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm12253Q5NC48 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm12253Q5NC48 Gm30023-201ENSMUST00000197970 889 ntBASIC20.41■□□□□ 0.86
Gm12253Q5NC48 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gm12253Q5NC48 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Gm12253Q5NC48 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.39■□□□□ 0.86
Gm12253Q5NC48 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm12253Q5NC48 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm12253Q5NC48 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm12253Q5NC48 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.38■□□□□ 0.85
Gm12253Q5NC48 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm12253Q5NC48 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm12253Q5NC48 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm12253Q5NC48 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm12253Q5NC48 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm12253Q5NC48 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12253Q5NC48 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm12253Q5NC48 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm12253Q5NC48 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Gm12253Q5NC48 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Gm12253Q5NC48 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm12253Q5NC48 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm12253Q5NC48 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm12253Q5NC48 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.33■□□□□ 0.85
Gm12253Q5NC48 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm12253Q5NC48 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12253Q5NC48 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12253Q5NC48 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12253Q5NC48 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12253Q5NC48 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm12253Q5NC48 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.31■□□□□ 0.84
Gm12253Q5NC48 Particl-201ENSMUST00000205370 1560 ntBASIC20.3■□□□□ 0.84
Gm12253Q5NC48 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm12253Q5NC48 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm12253Q5NC48 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12253Q5NC48 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12253Q5NC48 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Gm12253Q5NC48 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm12253Q5NC48 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm12253Q5NC48 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Gm12253Q5NC48 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm12253Q5NC48 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Gm12253Q5NC48 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.28■□□□□ 0.84
Gm12253Q5NC48 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Gm12253Q5NC48 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12253Q5NC48 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Gm12253Q5NC48 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm12253Q5NC48 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm12253Q5NC48 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm12253Q5NC48 Gm11175-201ENSMUST00000116172 543 ntBASIC20.24■□□□□ 0.83
Gm12253Q5NC48 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.24■□□□□ 0.83
Gm12253Q5NC48 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Gm12253Q5NC48 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
Gm12253Q5NC48 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12253Q5NC48 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12253Q5NC48 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Gm12253Q5NC48 Mir6538-201ENSMUST00000183713 110 ntBASIC20.23■□□□□ 0.83
Gm12253Q5NC48 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12253Q5NC48 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm12253Q5NC48 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm12253Q5NC48 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm12253Q5NC48 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm12253Q5NC48 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm12253Q5NC48 Gm6311-201ENSMUST00000073790 878 ntBASIC20.22■□□□□ 0.83
Gm12253Q5NC48 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm12253Q5NC48 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Gm12253Q5NC48 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm12253Q5NC48 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm12253Q5NC48 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm12253Q5NC48 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm12253Q5NC48 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm12253Q5NC48 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gm12253Q5NC48 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm12253Q5NC48 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gm12253Q5NC48 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm12253Q5NC48 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gm12253Q5NC48 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Gm12253Q5NC48 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm12253Q5NC48 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Gm12253Q5NC48 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.16■□□□□ 0.82
Gm12253Q5NC48 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm12253Q5NC48 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm12253Q5NC48 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm12253Q5NC48 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm12253Q5NC48 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm12253Q5NC48 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm12253Q5NC48 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm12253Q5NC48 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.14■□□□□ 0.81
Gm12253Q5NC48 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms