Protein–RNA interactions for Protein: Q3UWQ3

Ube2fb, NEDD8-conjugating enzyme UBE2F-B, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fbQ3UWQ3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube2fbQ3UWQ3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ube2fbQ3UWQ3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ube2fbQ3UWQ3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube2fbQ3UWQ3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.83■■□□□ 1.09
Ube2fbQ3UWQ3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Ube2fbQ3UWQ3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.82■■□□□ 1.08
Ube2fbQ3UWQ3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube2fbQ3UWQ3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube2fbQ3UWQ3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ube2fbQ3UWQ3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube2fbQ3UWQ3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube2fbQ3UWQ3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube2fbQ3UWQ3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ube2fbQ3UWQ3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.8■■□□□ 1.08
Ube2fbQ3UWQ3 Cap2-205ENSMUST00000225824 1634 ntBASIC21.8■■□□□ 1.08
Ube2fbQ3UWQ3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ube2fbQ3UWQ3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube2fbQ3UWQ3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube2fbQ3UWQ3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube2fbQ3UWQ3 Particl-201ENSMUST00000205370 1560 ntBASIC21.78■■□□□ 1.08
Ube2fbQ3UWQ3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube2fbQ3UWQ3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube2fbQ3UWQ3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube2fbQ3UWQ3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube2fbQ3UWQ3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube2fbQ3UWQ3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube2fbQ3UWQ3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube2fbQ3UWQ3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ube2fbQ3UWQ3 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.75■■□□□ 1.07
Ube2fbQ3UWQ3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube2fbQ3UWQ3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ube2fbQ3UWQ3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.74■■□□□ 1.07
Ube2fbQ3UWQ3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ube2fbQ3UWQ3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ube2fbQ3UWQ3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ube2fbQ3UWQ3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.73■■□□□ 1.07
Ube2fbQ3UWQ3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.73■■□□□ 1.07
Ube2fbQ3UWQ3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ube2fbQ3UWQ3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ube2fbQ3UWQ3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.72■■□□□ 1.07
Ube2fbQ3UWQ3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ube2fbQ3UWQ3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ube2fbQ3UWQ3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ube2fbQ3UWQ3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ube2fbQ3UWQ3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ube2fbQ3UWQ3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.71■■□□□ 1.07
Ube2fbQ3UWQ3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Ube2fbQ3UWQ3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ube2fbQ3UWQ3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ube2fbQ3UWQ3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.7■■□□□ 1.06
Ube2fbQ3UWQ3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ube2fbQ3UWQ3 Gm30023-201ENSMUST00000197970 889 ntBASIC21.69■■□□□ 1.06
Ube2fbQ3UWQ3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ube2fbQ3UWQ3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ube2fbQ3UWQ3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ube2fbQ3UWQ3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.68■■□□□ 1.06
Ube2fbQ3UWQ3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ube2fbQ3UWQ3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ube2fbQ3UWQ3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.67■■□□□ 1.06
Ube2fbQ3UWQ3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ube2fbQ3UWQ3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ube2fbQ3UWQ3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ube2fbQ3UWQ3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ube2fbQ3UWQ3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ube2fbQ3UWQ3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.66■■□□□ 1.06
Ube2fbQ3UWQ3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ube2fbQ3UWQ3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ube2fbQ3UWQ3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.63■■□□□ 1.05
Ube2fbQ3UWQ3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ube2fbQ3UWQ3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ube2fbQ3UWQ3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ube2fbQ3UWQ3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ube2fbQ3UWQ3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ube2fbQ3UWQ3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.6■■□□□ 1.05
Ube2fbQ3UWQ3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ube2fbQ3UWQ3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ube2fbQ3UWQ3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube2fbQ3UWQ3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ube2fbQ3UWQ3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.59■■□□□ 1.05
Ube2fbQ3UWQ3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ube2fbQ3UWQ3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube2fbQ3UWQ3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ube2fbQ3UWQ3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube2fbQ3UWQ3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube2fbQ3UWQ3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ube2fbQ3UWQ3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ube2fbQ3UWQ3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ube2fbQ3UWQ3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ube2fbQ3UWQ3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ube2fbQ3UWQ3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ube2fbQ3UWQ3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube2fbQ3UWQ3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms