Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cks1brtQ3UNC9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cks1brtQ3UNC9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cks1brtQ3UNC9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cks1brtQ3UNC9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cks1brtQ3UNC9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cks1brtQ3UNC9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cks1brtQ3UNC9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cks1brtQ3UNC9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cks1brtQ3UNC9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cks1brtQ3UNC9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cks1brtQ3UNC9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cks1brtQ3UNC9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cks1brtQ3UNC9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cks1brtQ3UNC9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cks1brtQ3UNC9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cks1brtQ3UNC9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Cks1brtQ3UNC9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cks1brtQ3UNC9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cks1brtQ3UNC9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cks1brtQ3UNC9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cks1brtQ3UNC9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cks1brtQ3UNC9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cks1brtQ3UNC9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cks1brtQ3UNC9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cks1brtQ3UNC9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cks1brtQ3UNC9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cks1brtQ3UNC9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cks1brtQ3UNC9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cks1brtQ3UNC9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cks1brtQ3UNC9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cks1brtQ3UNC9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Cks1brtQ3UNC9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.94■□□□□ 0.3
Cks1brtQ3UNC9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cks1brtQ3UNC9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1brtQ3UNC9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1brtQ3UNC9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1brtQ3UNC9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1brtQ3UNC9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1brtQ3UNC9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cks1brtQ3UNC9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cks1brtQ3UNC9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cks1brtQ3UNC9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cks1brtQ3UNC9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cks1brtQ3UNC9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cks1brtQ3UNC9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.92■□□□□ 0.3
Cks1brtQ3UNC9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cks1brtQ3UNC9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cks1brtQ3UNC9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.9■□□□□ 0.3
Cks1brtQ3UNC9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cks1brtQ3UNC9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cks1brtQ3UNC9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cks1brtQ3UNC9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cks1brtQ3UNC9 Il17rd-202ENSMUST00000223942 2186 ntBASIC16.89■□□□□ 0.3
Cks1brtQ3UNC9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cks1brtQ3UNC9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.89■□□□□ 0.29
Cks1brtQ3UNC9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cks1brtQ3UNC9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1brtQ3UNC9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1brtQ3UNC9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cks1brtQ3UNC9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.88■□□□□ 0.29
Cks1brtQ3UNC9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1brtQ3UNC9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cks1brtQ3UNC9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cks1brtQ3UNC9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cks1brtQ3UNC9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.87■□□□□ 0.29
Cks1brtQ3UNC9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cks1brtQ3UNC9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cks1brtQ3UNC9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cks1brtQ3UNC9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cks1brtQ3UNC9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cks1brtQ3UNC9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cks1brtQ3UNC9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cks1brtQ3UNC9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cks1brtQ3UNC9 Gm25238-201ENSMUST00000174914 89 ntBASIC16.85■□□□□ 0.29
Cks1brtQ3UNC9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cks1brtQ3UNC9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Cks1brtQ3UNC9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cks1brtQ3UNC9 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.84■□□□□ 0.29
Cks1brtQ3UNC9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cks1brtQ3UNC9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cks1brtQ3UNC9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cks1brtQ3UNC9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cks1brtQ3UNC9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.83■□□□□ 0.28
Cks1brtQ3UNC9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cks1brtQ3UNC9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.83■□□□□ 0.28
Cks1brtQ3UNC9 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.82■□□□□ 0.28
Cks1brtQ3UNC9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.82■□□□□ 0.28
Cks1brtQ3UNC9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cks1brtQ3UNC9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cks1brtQ3UNC9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms