Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Smcr8Q3UMB5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.41■■□□□ 1.66
Smcr8Q3UMB5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Smcr8Q3UMB5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.4■■□□□ 1.66
Smcr8Q3UMB5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Smcr8Q3UMB5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Smcr8Q3UMB5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Smcr8Q3UMB5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Smcr8Q3UMB5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Smcr8Q3UMB5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smcr8Q3UMB5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Smcr8Q3UMB5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smcr8Q3UMB5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.36■■□□□ 1.65
Smcr8Q3UMB5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Smcr8Q3UMB5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
Smcr8Q3UMB5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Smcr8Q3UMB5 Gm6311-201ENSMUST00000073790 878 ntBASIC25.35■■□□□ 1.65
Smcr8Q3UMB5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Smcr8Q3UMB5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.34■■□□□ 1.65
Smcr8Q3UMB5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Smcr8Q3UMB5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Smcr8Q3UMB5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Smcr8Q3UMB5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Smcr8Q3UMB5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.64
Smcr8Q3UMB5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Smcr8Q3UMB5 Gm11175-201ENSMUST00000116172 543 ntBASIC25.31■■□□□ 1.64
Smcr8Q3UMB5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
Smcr8Q3UMB5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Smcr8Q3UMB5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smcr8Q3UMB5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Smcr8Q3UMB5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Smcr8Q3UMB5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.28■■□□□ 1.64
Smcr8Q3UMB5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Smcr8Q3UMB5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.28■■□□□ 1.64
Smcr8Q3UMB5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
Smcr8Q3UMB5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Smcr8Q3UMB5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Smcr8Q3UMB5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Smcr8Q3UMB5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smcr8Q3UMB5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.25■■□□□ 1.63
Smcr8Q3UMB5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Smcr8Q3UMB5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Smcr8Q3UMB5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.24■■□□□ 1.63
Smcr8Q3UMB5 Mir6538-201ENSMUST00000183713 110 ntBASIC25.24■■□□□ 1.63
Smcr8Q3UMB5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.23■■□□□ 1.63
Smcr8Q3UMB5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Smcr8Q3UMB5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Smcr8Q3UMB5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.21■■□□□ 1.63
Smcr8Q3UMB5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Smcr8Q3UMB5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Smcr8Q3UMB5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.63
Smcr8Q3UMB5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Smcr8Q3UMB5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Smcr8Q3UMB5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.18■■□□□ 1.62
Smcr8Q3UMB5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Smcr8Q3UMB5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.17■■□□□ 1.62
Smcr8Q3UMB5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smcr8Q3UMB5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Smcr8Q3UMB5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smcr8Q3UMB5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Smcr8Q3UMB5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Smcr8Q3UMB5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Smcr8Q3UMB5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Smcr8Q3UMB5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Smcr8Q3UMB5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smcr8Q3UMB5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smcr8Q3UMB5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Smcr8Q3UMB5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.13■■□□□ 1.61
Smcr8Q3UMB5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.12■■□□□ 1.61
Smcr8Q3UMB5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Smcr8Q3UMB5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
Smcr8Q3UMB5 Gm4799-201ENSMUST00000095396 657 ntBASIC25.11■■□□□ 1.61
Smcr8Q3UMB5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Smcr8Q3UMB5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Smcr8Q3UMB5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smcr8Q3UMB5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smcr8Q3UMB5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Smcr8Q3UMB5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Smcr8Q3UMB5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Smcr8Q3UMB5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smcr8Q3UMB5 Gm37136-201ENSMUST00000194368 194 ntBASIC25.07■■□□□ 1.6
Smcr8Q3UMB5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Smcr8Q3UMB5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.07■■□□□ 1.6
Smcr8Q3UMB5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smcr8Q3UMB5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smcr8Q3UMB5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
Smcr8Q3UMB5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Smcr8Q3UMB5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.05■■□□□ 1.6
Smcr8Q3UMB5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Smcr8Q3UMB5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Smcr8Q3UMB5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Smcr8Q3UMB5 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.04■■□□□ 1.6
Smcr8Q3UMB5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Smcr8Q3UMB5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.03■■□□□ 1.6
Smcr8Q3UMB5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smcr8Q3UMB5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smcr8Q3UMB5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Smcr8Q3UMB5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smcr8Q3UMB5 Scarna2-201ENSMUST00000157560 414 ntBASIC25.01■■□□□ 1.59
Smcr8Q3UMB5 Mir3960-201ENSMUST00000198213 73 ntBASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms