Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22,89■■□□□ 1,26
Spg11Q3UHA3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22,89■■□□□ 1,25
Spg11Q3UHA3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22,89■■□□□ 1,25
Spg11Q3UHA3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22,88■■□□□ 1,25
Spg11Q3UHA3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22,88■■□□□ 1,25
Spg11Q3UHA3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Spg11Q3UHA3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22,88■■□□□ 1,25
Spg11Q3UHA3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Spg11Q3UHA3 Gm15820-201ENSMUST00000201566 728 ntBASIC22,87■■□□□ 1,25
Spg11Q3UHA3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22,86■■□□□ 1,25
Spg11Q3UHA3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22,86■■□□□ 1,25
Spg11Q3UHA3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Spg11Q3UHA3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22,85■■□□□ 1,25
Spg11Q3UHA3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Spg11Q3UHA3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22,83■■□□□ 1,25
Spg11Q3UHA3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22,83■■□□□ 1,25
Spg11Q3UHA3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22,82■■□□□ 1,24
Spg11Q3UHA3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22,82■■□□□ 1,24
Spg11Q3UHA3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Spg11Q3UHA3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22,81■■□□□ 1,24
Spg11Q3UHA3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22,81■■□□□ 1,24
Spg11Q3UHA3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22,8■■□□□ 1,24
Spg11Q3UHA3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22,8■■□□□ 1,24
Spg11Q3UHA3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22,8■■□□□ 1,24
Spg11Q3UHA3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22,79■■□□□ 1,24
Spg11Q3UHA3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22,79■■□□□ 1,24
Spg11Q3UHA3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22,79■■□□□ 1,24
Spg11Q3UHA3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Spg11Q3UHA3 Gm45102-201ENSMUST00000207427 857 ntBASIC22,78■■□□□ 1,24
Spg11Q3UHA3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22,78■■□□□ 1,24
Spg11Q3UHA3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22,78■■□□□ 1,24
Spg11Q3UHA3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22,77■■□□□ 1,24
Spg11Q3UHA3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22,77■■□□□ 1,24
Spg11Q3UHA3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22,77■■□□□ 1,24
Spg11Q3UHA3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22,76■■□□□ 1,23
Spg11Q3UHA3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22,76■■□□□ 1,23
Spg11Q3UHA3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22,76■■□□□ 1,23
Spg11Q3UHA3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Spg11Q3UHA3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22,76■■□□□ 1,23
Spg11Q3UHA3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22,74■■□□□ 1,23
Spg11Q3UHA3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22,74■■□□□ 1,23
Spg11Q3UHA3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22,74■■□□□ 1,23
Spg11Q3UHA3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,74■■□□□ 1,23
Spg11Q3UHA3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22,74■■□□□ 1,23
Spg11Q3UHA3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22,73■■□□□ 1,23
Spg11Q3UHA3 AC151971.4-201ENSMUST00000214717 704 ntBASIC22,73■■□□□ 1,23
Spg11Q3UHA3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22,72■■□□□ 1,23
Spg11Q3UHA3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22,72■■□□□ 1,23
Spg11Q3UHA3 Mir3960-201ENSMUST00000198213 73 ntBASIC22,72■■□□□ 1,23
Spg11Q3UHA3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22,72■■□□□ 1,23
Spg11Q3UHA3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22,71■■□□□ 1,23
Spg11Q3UHA3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Spg11Q3UHA3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22,7■■□□□ 1,22
Spg11Q3UHA3 Gm14117-201ENSMUST00000122417 843 ntBASIC22,7■■□□□ 1,22
Spg11Q3UHA3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Spg11Q3UHA3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22,69■■□□□ 1,22
Spg11Q3UHA3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Spg11Q3UHA3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22,68■■□□□ 1,22
Spg11Q3UHA3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22,68■■□□□ 1,22
Spg11Q3UHA3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
Spg11Q3UHA3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Spg11Q3UHA3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22,67■■□□□ 1,22
Spg11Q3UHA3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22,67■■□□□ 1,22
Spg11Q3UHA3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22,67■■□□□ 1,22
Spg11Q3UHA3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22,66■■□□□ 1,22
Spg11Q3UHA3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22,66■■□□□ 1,22
Spg11Q3UHA3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22,66■■□□□ 1,22
Spg11Q3UHA3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22,66■■□□□ 1,22
Spg11Q3UHA3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Spg11Q3UHA3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22,65■■□□□ 1,22
Spg11Q3UHA3 AC153911.1-201ENSMUST00000220378 758 ntBASIC22,65■■□□□ 1,22
Spg11Q3UHA3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Spg11Q3UHA3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22,64■■□□□ 1,21
Spg11Q3UHA3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22,64■■□□□ 1,21
Spg11Q3UHA3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22,64■■□□□ 1,21
Spg11Q3UHA3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22,64■■□□□ 1,21
Spg11Q3UHA3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Spg11Q3UHA3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22,63■■□□□ 1,21
Spg11Q3UHA3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22,63■■□□□ 1,21
Spg11Q3UHA3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22,62■■□□□ 1,21
Spg11Q3UHA3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22,61■■□□□ 1,21
Spg11Q3UHA3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Spg11Q3UHA3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22,6■■□□□ 1,21
Spg11Q3UHA3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22,6■■□□□ 1,21
Spg11Q3UHA3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Spg11Q3UHA3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Spg11Q3UHA3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22,59■■□□□ 1,21
Spg11Q3UHA3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22,59■■□□□ 1,21
Spg11Q3UHA3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Spg11Q3UHA3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Spg11Q3UHA3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22,58■■□□□ 1,21
Spg11Q3UHA3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22,58■■□□□ 1,21
Spg11Q3UHA3 Gm9959-201ENSMUST00000068277 390 ntBASIC22,58■■□□□ 1,2
Spg11Q3UHA3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22,58■■□□□ 1,2
Spg11Q3UHA3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Spg11Q3UHA3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22,57■■□□□ 1,2
Spg11Q3UHA3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22,56■■□□□ 1,2
Spg11Q3UHA3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22,56■■□□□ 1,2
Spg11Q3UHA3 Gm9910-201ENSMUST00000195385 1550 ntBASIC22,56■■□□□ 1,2
Spg11Q3UHA3 Gm30023-201ENSMUST00000197970 889 ntBASIC22,56■■□□□ 1,2
Retrieved 100 of 76,532 protein–RNA pairs in 24,9 ms