Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-2P42586 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkx2-2P42586 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.79■■□□□ 1.08
Nkx2-2P42586 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nkx2-2P42586 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-2P42586 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkx2-2P42586 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkx2-2P42586 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-2P42586 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-2P42586 Gm6821-201ENSMUST00000107540 542 ntBASIC21.75■■□□□ 1.07
Nkx2-2P42586 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-2P42586 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-2P42586 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkx2-2P42586 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.74■■□□□ 1.07
Nkx2-2P42586 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkx2-2P42586 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.74■■□□□ 1.07
Nkx2-2P42586 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.74■■□□□ 1.07
Nkx2-2P42586 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-2P42586 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Nkx2-2P42586 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.72■■□□□ 1.07
Nkx2-2P42586 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkx2-2P42586 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Nkx2-2P42586 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.71■■□□□ 1.07
Nkx2-2P42586 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-2P42586 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Nkx2-2P42586 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.71■■□□□ 1.07
Nkx2-2P42586 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-2P42586 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.7■■□□□ 1.06
Nkx2-2P42586 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkx2-2P42586 Gm8503-201ENSMUST00000118131 455 ntBASIC21.69■■□□□ 1.06
Nkx2-2P42586 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.69■■□□□ 1.06
Nkx2-2P42586 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkx2-2P42586 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nkx2-2P42586 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Nkx2-2P42586 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.66■■□□□ 1.06
Nkx2-2P42586 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.66■■□□□ 1.06
Nkx2-2P42586 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-2P42586 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nkx2-2P42586 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-2P42586 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.66■■□□□ 1.06
Nkx2-2P42586 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nkx2-2P42586 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.65■■□□□ 1.06
Nkx2-2P42586 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-2P42586 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-2P42586 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.64■■□□□ 1.05
Nkx2-2P42586 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkx2-2P42586 Particl-201ENSMUST00000205370 1560 ntBASIC21.63■■□□□ 1.05
Nkx2-2P42586 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nkx2-2P42586 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nkx2-2P42586 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.62■■□□□ 1.05
Nkx2-2P42586 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-2P42586 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkx2-2P42586 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-2P42586 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkx2-2P42586 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.6■■□□□ 1.05
Nkx2-2P42586 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-2P42586 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Nkx2-2P42586 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-2P42586 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkx2-2P42586 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Nkx2-2P42586 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nkx2-2P42586 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Nkx2-2P42586 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.59■■□□□ 1.05
Nkx2-2P42586 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Nkx2-2P42586 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Nkx2-2P42586 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
Nkx2-2P42586 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Nkx2-2P42586 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
Nkx2-2P42586 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Nkx2-2P42586 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Nkx2-2P42586 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-2P42586 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-2P42586 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Nkx2-2P42586 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Nkx2-2P42586 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.55■■□□□ 1.04
Nkx2-2P42586 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Nkx2-2P42586 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Nkx2-2P42586 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Nkx2-2P42586 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-2P42586 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Nkx2-2P42586 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-2P42586 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkx2-2P42586 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.52■■□□□ 1.04
Nkx2-2P42586 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Nkx2-2P42586 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Nkx2-2P42586 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-2P42586 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-2P42586 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-2P42586 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-2P42586 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-2P42586 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkx2-2P42586 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Nkx2-2P42586 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nkx2-2P42586 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-2P42586 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nkx2-2P42586 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.48■■□□□ 1.03
Nkx2-2P42586 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nkx2-2P42586 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Nkx2-2P42586 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkx2-2P42586 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms