Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HmgclP38060 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HmgclP38060 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.38■■□□□ 1.33
HmgclP38060 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HmgclP38060 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HmgclP38060 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
HmgclP38060 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HmgclP38060 Gm6821-201ENSMUST00000107540 542 ntBASIC23.37■■□□□ 1.33
HmgclP38060 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
HmgclP38060 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HmgclP38060 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HmgclP38060 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.36■■□□□ 1.33
HmgclP38060 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
HmgclP38060 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HmgclP38060 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.35■■□□□ 1.33
HmgclP38060 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.34■■□□□ 1.33
HmgclP38060 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HmgclP38060 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
HmgclP38060 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.32■■□□□ 1.32
HmgclP38060 Gm8503-201ENSMUST00000118131 455 ntBASIC23.32■■□□□ 1.32
HmgclP38060 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HmgclP38060 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HmgclP38060 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.31■■□□□ 1.32
HmgclP38060 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HmgclP38060 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HmgclP38060 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.3■■□□□ 1.32
HmgclP38060 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HmgclP38060 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HmgclP38060 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
HmgclP38060 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
HmgclP38060 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HmgclP38060 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HmgclP38060 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HmgclP38060 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.27■■□□□ 1.32
HmgclP38060 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.27■■□□□ 1.32
HmgclP38060 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HmgclP38060 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.27■■□□□ 1.31
HmgclP38060 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
HmgclP38060 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HmgclP38060 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HmgclP38060 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.25■■□□□ 1.31
HmgclP38060 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.25■■□□□ 1.31
HmgclP38060 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.24■■□□□ 1.31
HmgclP38060 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.24■■□□□ 1.31
HmgclP38060 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HmgclP38060 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.23■■□□□ 1.31
HmgclP38060 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HmgclP38060 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
HmgclP38060 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HmgclP38060 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HmgclP38060 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HmgclP38060 Particl-201ENSMUST00000205370 1560 ntBASIC23.21■■□□□ 1.31
HmgclP38060 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
HmgclP38060 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HmgclP38060 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HmgclP38060 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HmgclP38060 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HmgclP38060 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HmgclP38060 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HmgclP38060 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.17■■□□□ 1.3
HmgclP38060 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HmgclP38060 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
HmgclP38060 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
HmgclP38060 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HmgclP38060 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HmgclP38060 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
HmgclP38060 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.16■■□□□ 1.3
HmgclP38060 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
HmgclP38060 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.16■■□□□ 1.3
HmgclP38060 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HmgclP38060 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
HmgclP38060 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
HmgclP38060 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
HmgclP38060 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
HmgclP38060 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
HmgclP38060 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HmgclP38060 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
HmgclP38060 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HmgclP38060 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HmgclP38060 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HmgclP38060 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HmgclP38060 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
HmgclP38060 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HmgclP38060 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
HmgclP38060 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HmgclP38060 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HmgclP38060 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
HmgclP38060 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HmgclP38060 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HmgclP38060 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HmgclP38060 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
HmgclP38060 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
HmgclP38060 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HmgclP38060 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.08■■□□□ 1.29
HmgclP38060 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
HmgclP38060 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HmgclP38060 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
HmgclP38060 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HmgclP38060 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HmgclP38060 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms