Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab3dP35276 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rab3dP35276 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab3dP35276 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rab3dP35276 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab3dP35276 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab3dP35276 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.59■□□□□ 0.73
Rab3dP35276 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab3dP35276 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rab3dP35276 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rab3dP35276 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab3dP35276 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rab3dP35276 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rab3dP35276 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rab3dP35276 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rab3dP35276 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rab3dP35276 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab3dP35276 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rab3dP35276 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.55■□□□□ 0.72
Rab3dP35276 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Rab3dP35276 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rab3dP35276 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab3dP35276 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rab3dP35276 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rab3dP35276 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab3dP35276 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rab3dP35276 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rab3dP35276 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rab3dP35276 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab3dP35276 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rab3dP35276 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rab3dP35276 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
Rab3dP35276 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rab3dP35276 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rab3dP35276 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rab3dP35276 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Rab3dP35276 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rab3dP35276 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rab3dP35276 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab3dP35276 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab3dP35276 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab3dP35276 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab3dP35276 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rab3dP35276 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.47■□□□□ 0.71
Rab3dP35276 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.46■□□□□ 0.71
Rab3dP35276 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab3dP35276 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab3dP35276 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rab3dP35276 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab3dP35276 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab3dP35276 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab3dP35276 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab3dP35276 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rab3dP35276 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab3dP35276 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rab3dP35276 Gm26115-201ENSMUST00000175605 87 ntBASIC19.44■□□□□ 0.7
Rab3dP35276 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab3dP35276 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rab3dP35276 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab3dP35276 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Rab3dP35276 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab3dP35276 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab3dP35276 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab3dP35276 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab3dP35276 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab3dP35276 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab3dP35276 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.42■□□□□ 0.7
Rab3dP35276 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab3dP35276 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab3dP35276 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab3dP35276 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab3dP35276 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rab3dP35276 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rab3dP35276 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rab3dP35276 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab3dP35276 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab3dP35276 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab3dP35276 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab3dP35276 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rab3dP35276 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab3dP35276 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Rab3dP35276 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.4■□□□□ 0.7
Rab3dP35276 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab3dP35276 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab3dP35276 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab3dP35276 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rab3dP35276 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rab3dP35276 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rab3dP35276 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.38■□□□□ 0.69
Rab3dP35276 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.38■□□□□ 0.69
Rab3dP35276 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab3dP35276 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rab3dP35276 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab3dP35276 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab3dP35276 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab3dP35276 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rab3dP35276 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab3dP35276 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab3dP35276 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab3dP35276 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms