Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.11■□□□□ 0.97
P06344 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06344 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06344 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
P06344 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
P06344 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
P06344 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P06344 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P06344 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
P06344 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P06344 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
P06344 Gm11599-201ENSMUST00000118720 878 ntBASIC21.05■□□□□ 0.96
P06344 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P06344 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P06344 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.04■□□□□ 0.96
P06344 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
P06344 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
P06344 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.03■□□□□ 0.96
P06344 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
P06344 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P06344 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P06344 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
P06344 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21■□□□□ 0.95
P06344 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21■□□□□ 0.95
P06344 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
P06344 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21■□□□□ 0.95
P06344 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P06344 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
P06344 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.99■□□□□ 0.95
P06344 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P06344 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P06344 Particl-201ENSMUST00000205370 1560 ntBASIC20.98■□□□□ 0.95
P06344 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06344 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06344 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
P06344 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.97■□□□□ 0.95
P06344 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
P06344 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06344 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.96■□□□□ 0.95
P06344 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.96■□□□□ 0.95
P06344 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.94■□□□□ 0.94
P06344 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P06344 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P06344 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
P06344 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P06344 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
P06344 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P06344 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P06344 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P06344 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P06344 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
P06344 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
P06344 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P06344 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P06344 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P06344 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P06344 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
P06344 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P06344 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P06344 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
P06344 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
P06344 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P06344 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
P06344 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P06344 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.85■□□□□ 0.93
P06344 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P06344 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P06344 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
P06344 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P06344 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P06344 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
P06344 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.82■□□□□ 0.92
P06344 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
P06344 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P06344 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
P06344 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P06344 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.81■□□□□ 0.92
P06344 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P06344 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P06344 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P06344 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms