Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.11■□□□□ 0.97
P06344 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06344 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P06344 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
P06344 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P06344 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
P06344 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
P06344 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
P06344 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P06344 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P06344 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
P06344 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P06344 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
P06344 Gm11599-201ENSMUST00000118720 878 ntBASIC21.05■□□□□ 0.96
P06344 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P06344 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P06344 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.04■□□□□ 0.96
P06344 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
P06344 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
P06344 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.03■□□□□ 0.96
P06344 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
P06344 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P06344 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P06344 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
P06344 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21■□□□□ 0.95
P06344 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21■□□□□ 0.95
P06344 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
P06344 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21■□□□□ 0.95
P06344 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P06344 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
P06344 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.99■□□□□ 0.95
P06344 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P06344 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P06344 Particl-201ENSMUST00000205370 1560 ntBASIC20.98■□□□□ 0.95
P06344 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06344 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06344 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
P06344 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.97■□□□□ 0.95
P06344 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
P06344 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P06344 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.96■□□□□ 0.95
P06344 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P06344 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.96■□□□□ 0.95
P06344 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.94■□□□□ 0.94
P06344 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P06344 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P06344 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
P06344 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P06344 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
P06344 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P06344 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
P06344 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P06344 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P06344 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
P06344 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
P06344 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P06344 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P06344 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P06344 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
P06344 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
P06344 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P06344 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P06344 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
P06344 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
P06344 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P06344 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
P06344 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
P06344 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P06344 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.85■□□□□ 0.93
P06344 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P06344 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P06344 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
P06344 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P06344 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P06344 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
P06344 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.82■□□□□ 0.92
P06344 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
P06344 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P06344 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
P06344 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P06344 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.81■□□□□ 0.92
P06344 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P06344 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P06344 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P06344 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms