Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Col4a1P02463 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Col4a1P02463 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.41
Col4a1P02463 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Col4a1P02463 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Col4a1P02463 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Col4a1P02463 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Col4a1P02463 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Col4a1P02463 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Col4a1P02463 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Col4a1P02463 Gm45364-201ENSMUST00000210883 159 ntBASIC30.02■■■□□ 2.4
Col4a1P02463 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Col4a1P02463 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.01■■■□□ 2.39
Col4a1P02463 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Col4a1P02463 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Col4a1P02463 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Col4a1P02463 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Col4a1P02463 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Col4a1P02463 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col4a1P02463 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col4a1P02463 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.98■■■□□ 2.39
Col4a1P02463 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col4a1P02463 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Col4a1P02463 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col4a1P02463 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.96■■■□□ 2.39
Col4a1P02463 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col4a1P02463 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC29.95■■■□□ 2.39
Col4a1P02463 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.95■■■□□ 2.38
Col4a1P02463 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.94■■■□□ 2.38
Col4a1P02463 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.94■■■□□ 2.38
Col4a1P02463 Scarna2-201ENSMUST00000157560 414 ntBASIC29.93■■■□□ 2.38
Col4a1P02463 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Col4a1P02463 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Col4a1P02463 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Col4a1P02463 Gm37136-201ENSMUST00000194368 194 ntBASIC29.9■■■□□ 2.38
Col4a1P02463 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
Col4a1P02463 Gm4799-201ENSMUST00000095396 657 ntBASIC29.88■■■□□ 2.37
Col4a1P02463 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Col4a1P02463 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.88■■■□□ 2.37
Col4a1P02463 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col4a1P02463 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Col4a1P02463 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.85■■■□□ 2.37
Col4a1P02463 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Col4a1P02463 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Col4a1P02463 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.84■■■□□ 2.37
Col4a1P02463 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Col4a1P02463 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Col4a1P02463 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Col4a1P02463 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC29.82■■■□□ 2.36
Col4a1P02463 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
Col4a1P02463 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Col4a1P02463 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Col4a1P02463 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC29.82■■■□□ 2.36
Col4a1P02463 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Col4a1P02463 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Col4a1P02463 Gm27502-201ENSMUST00000183495 199 ntBASIC29.81■■■□□ 2.36
Col4a1P02463 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col4a1P02463 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col4a1P02463 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Col4a1P02463 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Col4a1P02463 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29.79■■■□□ 2.36
Col4a1P02463 Gm9806-201ENSMUST00000051080 552 ntBASIC29.79■■■□□ 2.36
Col4a1P02463 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Col4a1P02463 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Col4a1P02463 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC29.79■■■□□ 2.36
Col4a1P02463 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.79■■■□□ 2.36
Col4a1P02463 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.79■■■□□ 2.36
Col4a1P02463 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.78■■■□□ 2.36
Col4a1P02463 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Col4a1P02463 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.78■■■□□ 2.36
Col4a1P02463 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
Col4a1P02463 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Col4a1P02463 Mir3960-201ENSMUST00000198213 73 ntBASIC29.77■■■□□ 2.36
Col4a1P02463 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.77■■■□□ 2.36
Col4a1P02463 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
Col4a1P02463 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC29.76■■■□□ 2.36
Col4a1P02463 Gm12366-201ENSMUST00000121722 873 ntBASIC29.76■■■□□ 2.36
Col4a1P02463 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC29.76■■■□□ 2.36
Col4a1P02463 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC29.76■■■□□ 2.36
Col4a1P02463 Gm5786-201ENSMUST00000085368 882 ntBASIC29.76■■■□□ 2.36
Col4a1P02463 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.76■■■□□ 2.35
Col4a1P02463 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.74■■■□□ 2.35
Col4a1P02463 Gm16437-201ENSMUST00000025669 507 ntBASIC29.74■■■□□ 2.35
Col4a1P02463 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col4a1P02463 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Col4a1P02463 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Col4a1P02463 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
Col4a1P02463 Gm11687-201ENSMUST00000118911 886 ntBASIC29.72■■■□□ 2.35
Col4a1P02463 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Col4a1P02463 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col4a1P02463 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC29.71■■■□□ 2.35
Col4a1P02463 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Col4a1P02463 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Col4a1P02463 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col4a1P02463 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Col4a1P02463 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Col4a1P02463 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Col4a1P02463 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Col4a1P02463 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.66■■■□□ 2.34
Col4a1P02463 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms