Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Matn4O89029 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Matn4O89029 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Matn4O89029 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Matn4O89029 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Matn4O89029 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.36■■□□□ 1.17
Matn4O89029 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Matn4O89029 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Matn4O89029 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Matn4O89029 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Matn4O89029 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Matn4O89029 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Matn4O89029 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Matn4O89029 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Matn4O89029 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.34■■□□□ 1.17
Matn4O89029 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Matn4O89029 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Matn4O89029 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.33■■□□□ 1.17
Matn4O89029 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Matn4O89029 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Matn4O89029 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Matn4O89029 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Matn4O89029 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Matn4O89029 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Matn4O89029 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Matn4O89029 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Matn4O89029 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Matn4O89029 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Matn4O89029 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Matn4O89029 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Matn4O89029 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Matn4O89029 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Matn4O89029 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Matn4O89029 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Matn4O89029 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Matn4O89029 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Matn4O89029 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Matn4O89029 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Matn4O89029 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Matn4O89029 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Matn4O89029 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Matn4O89029 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Matn4O89029 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Matn4O89029 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Matn4O89029 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.25■■□□□ 1.15
Matn4O89029 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.24■■□□□ 1.15
Matn4O89029 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Matn4O89029 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Matn4O89029 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Matn4O89029 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.23■■□□□ 1.15
Matn4O89029 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Matn4O89029 Zfp131-205ENSMUST00000223812 663 ntBASIC22.23■■□□□ 1.15
Matn4O89029 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Matn4O89029 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.22■■□□□ 1.15
Matn4O89029 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.22■■□□□ 1.15
Matn4O89029 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Matn4O89029 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Matn4O89029 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Matn4O89029 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Matn4O89029 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Matn4O89029 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Matn4O89029 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.2■■□□□ 1.14
Matn4O89029 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Matn4O89029 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Matn4O89029 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.19■■□□□ 1.14
Matn4O89029 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Matn4O89029 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.17■■□□□ 1.14
Matn4O89029 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.17■■□□□ 1.14
Matn4O89029 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.17■■□□□ 1.14
Matn4O89029 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Matn4O89029 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
Matn4O89029 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.16■■□□□ 1.14
Matn4O89029 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Matn4O89029 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Matn4O89029 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Matn4O89029 Gm24970-201ENSMUST00000175582 82 ntBASIC22.15■■□□□ 1.14
Matn4O89029 Gm30023-201ENSMUST00000197970 889 ntBASIC22.15■■□□□ 1.14
Matn4O89029 Gm9397-201ENSMUST00000200125 605 ntBASIC22.15■■□□□ 1.14
Matn4O89029 Particl-201ENSMUST00000205370 1560 ntBASIC22.14■■□□□ 1.13
Matn4O89029 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Matn4O89029 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Matn4O89029 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Matn4O89029 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.12■■□□□ 1.13
Matn4O89029 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Matn4O89029 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Matn4O89029 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.11■■□□□ 1.13
Matn4O89029 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Matn4O89029 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.11■■□□□ 1.13
Matn4O89029 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Matn4O89029 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Matn4O89029 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Matn4O89029 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.1■■□□□ 1.13
Matn4O89029 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Matn4O89029 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Matn4O89029 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Matn4O89029 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Matn4O89029 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Matn4O89029 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Matn4O89029 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Matn4O89029 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms