Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.33■□□□□ 0.68
Pfdn2O70591 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn2O70591 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn2O70591 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn2O70591 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn2O70591 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Pfdn2O70591 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pfdn2O70591 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pfdn2O70591 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pfdn2O70591 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn2O70591 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn2O70591 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pfdn2O70591 Gm16148-201ENSMUST00000119653 893 ntBASIC19.3■□□□□ 0.68
Pfdn2O70591 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pfdn2O70591 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pfdn2O70591 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pfdn2O70591 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pfdn2O70591 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Pfdn2O70591 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pfdn2O70591 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pfdn2O70591 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn2O70591 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pfdn2O70591 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn2O70591 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pfdn2O70591 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pfdn2O70591 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pfdn2O70591 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pfdn2O70591 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pfdn2O70591 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pfdn2O70591 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn2O70591 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Pfdn2O70591 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn2O70591 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn2O70591 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn2O70591 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Pfdn2O70591 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pfdn2O70591 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn2O70591 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn2O70591 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Pfdn2O70591 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pfdn2O70591 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.24■□□□□ 0.67
Pfdn2O70591 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pfdn2O70591 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn2O70591 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pfdn2O70591 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.23■□□□□ 0.67
Pfdn2O70591 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn2O70591 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn2O70591 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pfdn2O70591 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn2O70591 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pfdn2O70591 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn2O70591 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pfdn2O70591 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pfdn2O70591 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pfdn2O70591 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn2O70591 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn2O70591 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pfdn2O70591 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn2O70591 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pfdn2O70591 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn2O70591 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn2O70591 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pfdn2O70591 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn2O70591 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn2O70591 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn2O70591 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn2O70591 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn2O70591 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pfdn2O70591 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Pfdn2O70591 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pfdn2O70591 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn2O70591 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn2O70591 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn2O70591 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.15■□□□□ 0.66
Pfdn2O70591 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pfdn2O70591 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pfdn2O70591 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pfdn2O70591 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pfdn2O70591 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn2O70591 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn2O70591 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn2O70591 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn2O70591 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pfdn2O70591 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pfdn2O70591 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn2O70591 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn2O70591 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn2O70591 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn2O70591 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn2O70591 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn2O70591 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pfdn2O70591 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pfdn2O70591 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn2O70591 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.1■□□□□ 0.65
Pfdn2O70591 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn2O70591 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pfdn2O70591 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pfdn2O70591 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pfdn2O70591 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.09■□□□□ 0.65
Pfdn2O70591 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms