Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Rpl35aO55142 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpl35aO55142 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpl35aO55142 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpl35aO55142 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.46■□□□□ 0.39
Rpl35aO55142 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rpl35aO55142 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rpl35aO55142 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC17.46■□□□□ 0.39
Rpl35aO55142 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpl35aO55142 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpl35aO55142 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rpl35aO55142 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rpl35aO55142 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.45■□□□□ 0.38
Rpl35aO55142 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpl35aO55142 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rpl35aO55142 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl35aO55142 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.44■□□□□ 0.38
Rpl35aO55142 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rpl35aO55142 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpl35aO55142 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpl35aO55142 Gm7432-201ENSMUST00000210343 879 ntBASIC17.43■□□□□ 0.38
Rpl35aO55142 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpl35aO55142 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Rpl35aO55142 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl35aO55142 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl35aO55142 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpl35aO55142 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl35aO55142 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl35aO55142 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rpl35aO55142 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.41■□□□□ 0.38
Rpl35aO55142 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.41■□□□□ 0.38
Rpl35aO55142 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl35aO55142 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rpl35aO55142 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl35aO55142 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rpl35aO55142 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl35aO55142 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl35aO55142 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rpl35aO55142 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
Rpl35aO55142 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpl35aO55142 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpl35aO55142 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.37■□□□□ 0.37
Rpl35aO55142 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.36■□□□□ 0.37
Rpl35aO55142 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rpl35aO55142 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl35aO55142 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
Rpl35aO55142 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl35aO55142 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl35aO55142 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl35aO55142 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpl35aO55142 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Rpl35aO55142 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl35aO55142 Gm11599-201ENSMUST00000118720 878 ntBASIC17.34■□□□□ 0.37
Rpl35aO55142 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.34■□□□□ 0.37
Rpl35aO55142 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl35aO55142 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl35aO55142 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpl35aO55142 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl35aO55142 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rpl35aO55142 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.33■□□□□ 0.37
Rpl35aO55142 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl35aO55142 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rpl35aO55142 Particl-201ENSMUST00000205370 1560 ntBASIC17.32■□□□□ 0.36
Rpl35aO55142 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rpl35aO55142 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.32■□□□□ 0.36
Rpl35aO55142 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl35aO55142 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl35aO55142 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl35aO55142 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl35aO55142 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rpl35aO55142 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl35aO55142 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.3■□□□□ 0.36
Rpl35aO55142 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl35aO55142 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rpl35aO55142 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl35aO55142 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rpl35aO55142 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl35aO55142 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl35aO55142 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl35aO55142 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.28■□□□□ 0.36
Rpl35aO55142 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Rpl35aO55142 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpl35aO55142 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpl35aO55142 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rpl35aO55142 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rpl35aO55142 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl35aO55142 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rpl35aO55142 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpl35aO55142 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpl35aO55142 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rpl35aO55142 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.23■□□□□ 0.35
Rpl35aO55142 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl35aO55142 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl35aO55142 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl35aO55142 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl35aO55142 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpl35aO55142 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rpl35aO55142 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rpl35aO55142 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.22■□□□□ 0.35
Rpl35aO55142 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms