Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Cntnap1O54991 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cntnap1O54991 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cntnap1O54991 Gm5522-201ENSMUST00000189483 1242 ntBASIC32.28■■■□□ 2.76
Cntnap1O54991 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cntnap1O54991 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Cntnap1O54991 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC32.27■■■□□ 2.76
Cntnap1O54991 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Cntnap1O54991 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC32.26■■■□□ 2.75
Cntnap1O54991 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
Cntnap1O54991 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Cntnap1O54991 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Cntnap1O54991 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Cntnap1O54991 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Cntnap1O54991 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Cntnap1O54991 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC32.2■■■□□ 2.75
Cntnap1O54991 Gm10420-201ENSMUST00000121713 882 ntBASIC32.2■■■□□ 2.75
Cntnap1O54991 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Cntnap1O54991 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Cntnap1O54991 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Cntnap1O54991 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Cntnap1O54991 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Cntnap1O54991 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cntnap1O54991 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cntnap1O54991 AC151971.4-201ENSMUST00000214717 704 ntBASIC32.17■■■□□ 2.74
Cntnap1O54991 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
Cntnap1O54991 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Cntnap1O54991 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Cntnap1O54991 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Cntnap1O54991 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Cntnap1O54991 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC32.15■■■□□ 2.74
Cntnap1O54991 AC093043.1-201ENSMUST00000226700 898 ntBASIC32.14■■■□□ 2.74
Cntnap1O54991 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Cntnap1O54991 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
Cntnap1O54991 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC32.12■■■□□ 2.73
Cntnap1O54991 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
Cntnap1O54991 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Cntnap1O54991 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
Cntnap1O54991 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
Cntnap1O54991 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cntnap1O54991 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Cntnap1O54991 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cntnap1O54991 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cntnap1O54991 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cntnap1O54991 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cntnap1O54991 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cntnap1O54991 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
Cntnap1O54991 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Cntnap1O54991 Rps24-207ENSMUST00000224568 714 ntBASIC32.05■■■□□ 2.72
Cntnap1O54991 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cntnap1O54991 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
Cntnap1O54991 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.04■■■□□ 2.72
Cntnap1O54991 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cntnap1O54991 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cntnap1O54991 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC32.02■■■□□ 2.72
Cntnap1O54991 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Cntnap1O54991 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC32.02■■■□□ 2.72
Cntnap1O54991 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cntnap1O54991 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Cntnap1O54991 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC32.01■■■□□ 2.71
Cntnap1O54991 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC32.01■■■□□ 2.71
Cntnap1O54991 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Cntnap1O54991 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cntnap1O54991 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Cntnap1O54991 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cntnap1O54991 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.99■■■□□ 2.71
Cntnap1O54991 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cntnap1O54991 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Cntnap1O54991 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Cntnap1O54991 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Cntnap1O54991 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC31.95■■■□□ 2.71
Cntnap1O54991 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Cntnap1O54991 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.94■■■□□ 2.7
Cntnap1O54991 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
Cntnap1O54991 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Cntnap1O54991 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC31.94■■■□□ 2.7
Cntnap1O54991 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC31.93■■■□□ 2.7
Cntnap1O54991 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
Cntnap1O54991 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC31.93■■■□□ 2.7
Cntnap1O54991 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Cntnap1O54991 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cntnap1O54991 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.91■■■□□ 2.7
Cntnap1O54991 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Cntnap1O54991 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cntnap1O54991 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.9■■■□□ 2.7
Cntnap1O54991 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC31.89■■■□□ 2.7
Cntnap1O54991 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cntnap1O54991 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cntnap1O54991 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cntnap1O54991 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC31.86■■■□□ 2.69
Cntnap1O54991 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cntnap1O54991 Gm45102-201ENSMUST00000207427 857 ntBASIC31.85■■■□□ 2.69
Cntnap1O54991 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cntnap1O54991 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cntnap1O54991 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC31.84■■■□□ 2.69
Cntnap1O54991 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.84■■■□□ 2.69
Cntnap1O54991 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cntnap1O54991 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Cntnap1O54991 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cntnap1O54991 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC31.81■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms