Protein–RNA interactions for Protein: J3QP38

Gm21900, Predicted gene, 21900, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21900J3QP38 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gm21900J3QP38 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21900J3QP38 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.14■□□□□ 0.49
Gm21900J3QP38 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21900J3QP38 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21900J3QP38 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gm21900J3QP38 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm21900J3QP38 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gm21900J3QP38 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Gm21900J3QP38 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm21900J3QP38 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm21900J3QP38 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm21900J3QP38 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm21900J3QP38 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gm21900J3QP38 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.11■□□□□ 0.49
Gm21900J3QP38 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm21900J3QP38 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Gm21900J3QP38 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm21900J3QP38 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm21900J3QP38 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm21900J3QP38 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gm21900J3QP38 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm21900J3QP38 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm21900J3QP38 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm21900J3QP38 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm21900J3QP38 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.08■□□□□ 0.48
Gm21900J3QP38 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm21900J3QP38 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm21900J3QP38 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gm21900J3QP38 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm21900J3QP38 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm21900J3QP38 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.07■□□□□ 0.48
Gm21900J3QP38 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm21900J3QP38 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm21900J3QP38 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Gm21900J3QP38 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
Gm21900J3QP38 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm21900J3QP38 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm21900J3QP38 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm21900J3QP38 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm21900J3QP38 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Gm21900J3QP38 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.03■□□□□ 0.48
Gm21900J3QP38 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm21900J3QP38 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm21900J3QP38 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm21900J3QP38 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm21900J3QP38 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm21900J3QP38 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm21900J3QP38 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.02■□□□□ 0.48
Gm21900J3QP38 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Gm21900J3QP38 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm21900J3QP38 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm21900J3QP38 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.01■□□□□ 0.47
Gm21900J3QP38 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Gm21900J3QP38 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm21900J3QP38 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm21900J3QP38 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm21900J3QP38 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm21900J3QP38 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm21900J3QP38 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm21900J3QP38 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gm21900J3QP38 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Gm26115-201ENSMUST00000175605 87 ntBASIC17.98■□□□□ 0.47
Gm21900J3QP38 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Gm21900J3QP38 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21900J3QP38 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21900J3QP38 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21900J3QP38 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21900J3QP38 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Gm21900J3QP38 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21900J3QP38 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Gm21900J3QP38 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21900J3QP38 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm21900J3QP38 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21900J3QP38 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Gm21900J3QP38 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21900J3QP38 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21900J3QP38 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Gm21900J3QP38 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms