Protein–RNA interactions for Protein: J3QMJ4

Smlr1, Small leucine-rich protein 1, mousemouse

Predictions only

Length 66 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smlr1J3QMJ4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smlr1J3QMJ4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smlr1J3QMJ4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Notumos-201ENSMUST00000151998 2659 ntBASIC15.2■□□□□ 0.02
Smlr1J3QMJ4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smlr1J3QMJ4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smlr1J3QMJ4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smlr1J3QMJ4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smlr1J3QMJ4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Smlr1J3QMJ4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smlr1J3QMJ4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smlr1J3QMJ4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Smlr1J3QMJ4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Smlr1J3QMJ4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smlr1J3QMJ4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Smlr1J3QMJ4 Gm43445-201ENSMUST00000198564 2091 ntBASIC15.16■□□□□ 0.02
Smlr1J3QMJ4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Smlr1J3QMJ4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smlr1J3QMJ4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smlr1J3QMJ4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smlr1J3QMJ4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Smlr1J3QMJ4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smlr1J3QMJ4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smlr1J3QMJ4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Smlr1J3QMJ4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Smlr1J3QMJ4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smlr1J3QMJ4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smlr1J3QMJ4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smlr1J3QMJ4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smlr1J3QMJ4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smlr1J3QMJ4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smlr1J3QMJ4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smlr1J3QMJ4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smlr1J3QMJ4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smlr1J3QMJ4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smlr1J3QMJ4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smlr1J3QMJ4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC15.1■□□□□ 0.01
Smlr1J3QMJ4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smlr1J3QMJ4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smlr1J3QMJ4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smlr1J3QMJ4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smlr1J3QMJ4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smlr1J3QMJ4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smlr1J3QMJ4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Smlr1J3QMJ4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Smlr1J3QMJ4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Smlr1J3QMJ4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smlr1J3QMJ4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smlr1J3QMJ4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Smlr1J3QMJ4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smlr1J3QMJ4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smlr1J3QMJ4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smlr1J3QMJ4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smlr1J3QMJ4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smlr1J3QMJ4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Smlr1J3QMJ4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smlr1J3QMJ4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smlr1J3QMJ4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smlr1J3QMJ4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.05■□□□□ 0
Smlr1J3QMJ4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smlr1J3QMJ4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smlr1J3QMJ4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smlr1J3QMJ4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Smlr1J3QMJ4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Smlr1J3QMJ4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smlr1J3QMJ4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smlr1J3QMJ4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smlr1J3QMJ4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smlr1J3QMJ4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms