Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Mir3960-201ENSMUST00000198213 73 ntBASIC25.05■■□□□ 1.6
Ccdc188F6WEU2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc188F6WEU2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Ccdc188F6WEU2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ccdc188F6WEU2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Ccdc188F6WEU2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ccdc188F6WEU2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.03■■□□□ 1.6
Ccdc188F6WEU2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc188F6WEU2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.02■■□□□ 1.6
Ccdc188F6WEU2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.02■■□□□ 1.6
Ccdc188F6WEU2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.02■■□□□ 1.6
Ccdc188F6WEU2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.02■■□□□ 1.6
Ccdc188F6WEU2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc188F6WEU2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ccdc188F6WEU2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ccdc188F6WEU2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ccdc188F6WEU2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ccdc188F6WEU2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.01■■□□□ 1.59
Ccdc188F6WEU2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ccdc188F6WEU2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Ccdc188F6WEU2 Gm10420-201ENSMUST00000121713 882 ntBASIC24.99■■□□□ 1.59
Ccdc188F6WEU2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ccdc188F6WEU2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ccdc188F6WEU2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
Ccdc188F6WEU2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ccdc188F6WEU2 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.98■■□□□ 1.59
Ccdc188F6WEU2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ccdc188F6WEU2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ccdc188F6WEU2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.97■■□□□ 1.59
Ccdc188F6WEU2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ccdc188F6WEU2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ccdc188F6WEU2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ccdc188F6WEU2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.96■■□□□ 1.59
Ccdc188F6WEU2 Rps24-207ENSMUST00000224568 714 ntBASIC24.96■■□□□ 1.59
Ccdc188F6WEU2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ccdc188F6WEU2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Ccdc188F6WEU2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Ccdc188F6WEU2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ccdc188F6WEU2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ccdc188F6WEU2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ccdc188F6WEU2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ccdc188F6WEU2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.93■■□□□ 1.58
Ccdc188F6WEU2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ccdc188F6WEU2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.93■■□□□ 1.58
Ccdc188F6WEU2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.92■■□□□ 1.58
Ccdc188F6WEU2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ccdc188F6WEU2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ccdc188F6WEU2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ccdc188F6WEU2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.9■■□□□ 1.58
Ccdc188F6WEU2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Ccdc188F6WEU2 Serp2-204ENSMUST00000228055 705 ntBASIC24.9■■□□□ 1.58
Ccdc188F6WEU2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ccdc188F6WEU2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.88■■□□□ 1.57
Ccdc188F6WEU2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Ccdc188F6WEU2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Ccdc188F6WEU2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.86■■□□□ 1.57
Ccdc188F6WEU2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ccdc188F6WEU2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.85■■□□□ 1.57
Ccdc188F6WEU2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc188F6WEU2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc188F6WEU2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ccdc188F6WEU2 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.84■■□□□ 1.57
Ccdc188F6WEU2 Gm15820-201ENSMUST00000201566 728 ntBASIC24.84■■□□□ 1.57
Ccdc188F6WEU2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Ccdc188F6WEU2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ccdc188F6WEU2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc188F6WEU2 Gm14117-201ENSMUST00000122417 843 ntBASIC24.81■■□□□ 1.56
Ccdc188F6WEU2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.81■■□□□ 1.56
Ccdc188F6WEU2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ccdc188F6WEU2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ccdc188F6WEU2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc188F6WEU2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.79■■□□□ 1.56
Ccdc188F6WEU2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.79■■□□□ 1.56
Ccdc188F6WEU2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.79■■□□□ 1.56
Ccdc188F6WEU2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc188F6WEU2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc188F6WEU2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ccdc188F6WEU2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.78■■□□□ 1.56
Ccdc188F6WEU2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ccdc188F6WEU2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Ccdc188F6WEU2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Ccdc188F6WEU2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Ccdc188F6WEU2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Ccdc188F6WEU2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ccdc188F6WEU2 Gm45102-201ENSMUST00000207427 857 ntBASIC24.76■■□□□ 1.55
Ccdc188F6WEU2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ccdc188F6WEU2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ccdc188F6WEU2 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.76■■□□□ 1.55
Ccdc188F6WEU2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ccdc188F6WEU2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.75■■□□□ 1.55
Ccdc188F6WEU2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ccdc188F6WEU2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Ccdc188F6WEU2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
Ccdc188F6WEU2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.74■■□□□ 1.55
Ccdc188F6WEU2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ccdc188F6WEU2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Ccdc188F6WEU2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ccdc188F6WEU2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ccdc188F6WEU2 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.72■■□□□ 1.55
Ccdc188F6WEU2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms