Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.13■■□□□ 1.45
Ccdc149F6V035 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ccdc149F6V035 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
Ccdc149F6V035 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ccdc149F6V035 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ccdc149F6V035 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.11■■□□□ 1.45
Ccdc149F6V035 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Ccdc149F6V035 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Ccdc149F6V035 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.1■■□□□ 1.45
Ccdc149F6V035 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ccdc149F6V035 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ccdc149F6V035 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ccdc149F6V035 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.09■■□□□ 1.45
Ccdc149F6V035 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Ccdc149F6V035 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Ccdc149F6V035 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Ccdc149F6V035 Gm4799-201ENSMUST00000095396 657 ntBASIC24.07■■□□□ 1.44
Ccdc149F6V035 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ccdc149F6V035 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.05■■□□□ 1.44
Ccdc149F6V035 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccdc149F6V035 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccdc149F6V035 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccdc149F6V035 Gm37136-201ENSMUST00000194368 194 ntBASIC24.04■■□□□ 1.44
Ccdc149F6V035 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ccdc149F6V035 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ccdc149F6V035 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ccdc149F6V035 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccdc149F6V035 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ccdc149F6V035 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
Ccdc149F6V035 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Ccdc149F6V035 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccdc149F6V035 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ccdc149F6V035 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ccdc149F6V035 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Ccdc149F6V035 AC154454.1-201ENSMUST00000225253 216 ntBASIC24■■□□□ 1.43
Ccdc149F6V035 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24■■□□□ 1.43
Ccdc149F6V035 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ccdc149F6V035 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ccdc149F6V035 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Ccdc149F6V035 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ccdc149F6V035 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ccdc149F6V035 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ccdc149F6V035 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Ccdc149F6V035 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
Ccdc149F6V035 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.97■■□□□ 1.43
Ccdc149F6V035 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ccdc149F6V035 Mir3960-201ENSMUST00000198213 73 ntBASIC23.97■■□□□ 1.43
Ccdc149F6V035 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ccdc149F6V035 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc149F6V035 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ccdc149F6V035 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
Ccdc149F6V035 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Ccdc149F6V035 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc149F6V035 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc149F6V035 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Ccdc149F6V035 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.94■■□□□ 1.42
Ccdc149F6V035 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.94■■□□□ 1.42
Ccdc149F6V035 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ccdc149F6V035 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ccdc149F6V035 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc149F6V035 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc149F6V035 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ccdc149F6V035 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Ccdc149F6V035 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc149F6V035 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc149F6V035 Scarna2-201ENSMUST00000157560 414 ntBASIC23.9■■□□□ 1.42
Ccdc149F6V035 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Ccdc149F6V035 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc149F6V035 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc149F6V035 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc149F6V035 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc149F6V035 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc149F6V035 Cap2-205ENSMUST00000225824 1634 ntBASIC23.88■■□□□ 1.41
Ccdc149F6V035 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc149F6V035 Gm9806-201ENSMUST00000051080 552 ntBASIC23.88■■□□□ 1.41
Ccdc149F6V035 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.88■■□□□ 1.41
Ccdc149F6V035 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc149F6V035 Gm11687-201ENSMUST00000118911 886 ntBASIC23.87■■□□□ 1.41
Ccdc149F6V035 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc149F6V035 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc149F6V035 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc149F6V035 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.86■■□□□ 1.41
Ccdc149F6V035 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc149F6V035 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.86■■□□□ 1.41
Ccdc149F6V035 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Ccdc149F6V035 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.85■■□□□ 1.41
Ccdc149F6V035 Gm45364-201ENSMUST00000210883 159 ntBASIC23.85■■□□□ 1.41
Ccdc149F6V035 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.85■■□□□ 1.41
Ccdc149F6V035 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.84■■□□□ 1.41
Ccdc149F6V035 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc149F6V035 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc149F6V035 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc149F6V035 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc149F6V035 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc149F6V035 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc149F6V035 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc149F6V035 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.82■■□□□ 1.4
Ccdc149F6V035 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.82■■□□□ 1.4
Ccdc149F6V035 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc149F6V035 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms