Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C530025M09RikF6RGA8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C530025M09RikF6RGA8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C530025M09RikF6RGA8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
C530025M09RikF6RGA8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C530025M09RikF6RGA8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.5■□□□□ 0.07
C530025M09RikF6RGA8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
C530025M09RikF6RGA8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C530025M09RikF6RGA8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C530025M09RikF6RGA8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.48■□□□□ 0.07
C530025M09RikF6RGA8 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.48■□□□□ 0.07
C530025M09RikF6RGA8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C530025M09RikF6RGA8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C530025M09RikF6RGA8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C530025M09RikF6RGA8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C530025M09RikF6RGA8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C530025M09RikF6RGA8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
C530025M09RikF6RGA8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
C530025M09RikF6RGA8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
C530025M09RikF6RGA8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C530025M09RikF6RGA8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
C530025M09RikF6RGA8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C530025M09RikF6RGA8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C530025M09RikF6RGA8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.45■□□□□ 0.06
C530025M09RikF6RGA8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C530025M09RikF6RGA8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C530025M09RikF6RGA8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C530025M09RikF6RGA8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C530025M09RikF6RGA8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C530025M09RikF6RGA8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C530025M09RikF6RGA8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C530025M09RikF6RGA8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
C530025M09RikF6RGA8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C530025M09RikF6RGA8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C530025M09RikF6RGA8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
C530025M09RikF6RGA8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.41■□□□□ 0.06
C530025M09RikF6RGA8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
C530025M09RikF6RGA8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.41■□□□□ 0.06
C530025M09RikF6RGA8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C530025M09RikF6RGA8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
C530025M09RikF6RGA8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.4■□□□□ 0.06
C530025M09RikF6RGA8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C530025M09RikF6RGA8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.4■□□□□ 0.06
C530025M09RikF6RGA8 Zfp131-205ENSMUST00000223812 663 ntBASIC15.4■□□□□ 0.06
C530025M09RikF6RGA8 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.39■□□□□ 0.05
C530025M09RikF6RGA8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC15.39■□□□□ 0.05
C530025M09RikF6RGA8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
C530025M09RikF6RGA8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C530025M09RikF6RGA8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.39■□□□□ 0.05
C530025M09RikF6RGA8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
C530025M09RikF6RGA8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C530025M09RikF6RGA8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.37■□□□□ 0.05
C530025M09RikF6RGA8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C530025M09RikF6RGA8 Gm30023-201ENSMUST00000197970 889 ntBASIC15.37■□□□□ 0.05
C530025M09RikF6RGA8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C530025M09RikF6RGA8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
C530025M09RikF6RGA8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C530025M09RikF6RGA8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C530025M09RikF6RGA8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C530025M09RikF6RGA8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C530025M09RikF6RGA8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
C530025M09RikF6RGA8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.36■□□□□ 0.05
C530025M09RikF6RGA8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C530025M09RikF6RGA8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C530025M09RikF6RGA8 Gm9397-201ENSMUST00000200125 605 ntBASIC15.35■□□□□ 0.05
C530025M09RikF6RGA8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C530025M09RikF6RGA8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
C530025M09RikF6RGA8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C530025M09RikF6RGA8 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.34■□□□□ 0.05
C530025M09RikF6RGA8 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.34■□□□□ 0.05
C530025M09RikF6RGA8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
C530025M09RikF6RGA8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C530025M09RikF6RGA8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C530025M09RikF6RGA8 Gm24970-201ENSMUST00000175582 82 ntBASIC15.33■□□□□ 0.04
C530025M09RikF6RGA8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C530025M09RikF6RGA8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC15.32■□□□□ 0.04
C530025M09RikF6RGA8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C530025M09RikF6RGA8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C530025M09RikF6RGA8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C530025M09RikF6RGA8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C530025M09RikF6RGA8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms