Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf213E9Q555 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf213E9Q555 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf213E9Q555 Pkd1-207ENSMUST00000228550 1050 ntBASIC12.04□□□□□ -0.48
Rnf213E9Q555 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf213E9Q555 AC151971.4-201ENSMUST00000214717 704 ntBASIC12.04□□□□□ -0.48
Rnf213E9Q555 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf213E9Q555 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf213E9Q555 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf213E9Q555 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf213E9Q555 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf213E9Q555 AC154454.1-201ENSMUST00000225253 216 ntBASIC12.03□□□□□ -0.48
Rnf213E9Q555 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf213E9Q555 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf213E9Q555 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rnf213E9Q555 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.03□□□□□ -0.48
Rnf213E9Q555 Gm15546-201ENSMUST00000122095 826 ntBASIC12.02□□□□□ -0.49
Rnf213E9Q555 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf213E9Q555 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf213E9Q555 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf213E9Q555 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf213E9Q555 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf213E9Q555 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf213E9Q555 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rnf213E9Q555 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.01□□□□□ -0.49
Rnf213E9Q555 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf213E9Q555 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf213E9Q555 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf213E9Q555 Gm13889-201ENSMUST00000099689 1386 ntBASIC12□□□□□ -0.49
Rnf213E9Q555 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf213E9Q555 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rnf213E9Q555 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rnf213E9Q555 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Rnf213E9Q555 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf213E9Q555 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC11.97□□□□□ -0.49
Rnf213E9Q555 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC11.97□□□□□ -0.49
Rnf213E9Q555 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.97□□□□□ -0.49
Rnf213E9Q555 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf213E9Q555 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf213E9Q555 Mir3960-201ENSMUST00000198213 73 ntBASIC11.97□□□□□ -0.49
Rnf213E9Q555 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf213E9Q555 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rnf213E9Q555 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf213E9Q555 Gm15820-201ENSMUST00000201566 728 ntBASIC11.96□□□□□ -0.49
Rnf213E9Q555 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf213E9Q555 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rnf213E9Q555 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC11.96□□□□□ -0.49
Rnf213E9Q555 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf213E9Q555 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC11.96□□□□□ -0.5
Rnf213E9Q555 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rnf213E9Q555 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf213E9Q555 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.95□□□□□ -0.5
Rnf213E9Q555 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rnf213E9Q555 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC11.95□□□□□ -0.5
Rnf213E9Q555 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC11.95□□□□□ -0.5
Rnf213E9Q555 AC153911.1-201ENSMUST00000220378 758 ntBASIC11.95□□□□□ -0.5
Rnf213E9Q555 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.94□□□□□ -0.5
Rnf213E9Q555 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf213E9Q555 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC11.94□□□□□ -0.5
Rnf213E9Q555 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf213E9Q555 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf213E9Q555 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rnf213E9Q555 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf213E9Q555 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf213E9Q555 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rnf213E9Q555 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf213E9Q555 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf213E9Q555 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf213E9Q555 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Rnf213E9Q555 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rnf213E9Q555 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf213E9Q555 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf213E9Q555 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf213E9Q555 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Rnf213E9Q555 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.92□□□□□ -0.5
Rnf213E9Q555 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Rnf213E9Q555 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC11.91□□□□□ -0.5
Rnf213E9Q555 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf213E9Q555 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf213E9Q555 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC11.91□□□□□ -0.5
Rnf213E9Q555 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rnf213E9Q555 Gm14117-201ENSMUST00000122417 843 ntBASIC11.91□□□□□ -0.5
Rnf213E9Q555 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.91□□□□□ -0.5
Rnf213E9Q555 Gm12818-201ENSMUST00000117562 1349 ntBASIC11.91□□□□□ -0.5
Rnf213E9Q555 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rnf213E9Q555 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf213E9Q555 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.9□□□□□ -0.5
Rnf213E9Q555 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf213E9Q555 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rnf213E9Q555 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rnf213E9Q555 Gm10420-201ENSMUST00000121713 882 ntBASIC11.9□□□□□ -0.51
Rnf213E9Q555 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf213E9Q555 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms