Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptchd4B9EKX1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ptchd4B9EKX1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.77■■□□□ 1.72
Ptchd4B9EKX1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Ptchd4B9EKX1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptchd4B9EKX1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptchd4B9EKX1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ptchd4B9EKX1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.76■■□□□ 1.71
Ptchd4B9EKX1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ptchd4B9EKX1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ptchd4B9EKX1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ptchd4B9EKX1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ptchd4B9EKX1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptchd4B9EKX1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ptchd4B9EKX1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ptchd4B9EKX1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptchd4B9EKX1 Gm37136-201ENSMUST00000194368 194 ntBASIC25.71■■□□□ 1.71
Ptchd4B9EKX1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ptchd4B9EKX1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptchd4B9EKX1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ptchd4B9EKX1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ptchd4B9EKX1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptchd4B9EKX1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ptchd4B9EKX1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Ptchd4B9EKX1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
Ptchd4B9EKX1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ptchd4B9EKX1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ptchd4B9EKX1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.65■■□□□ 1.7
Ptchd4B9EKX1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Ptchd4B9EKX1 Gm4799-201ENSMUST00000095396 657 ntBASIC25.65■■□□□ 1.7
Ptchd4B9EKX1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
Ptchd4B9EKX1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
Ptchd4B9EKX1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
Ptchd4B9EKX1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ptchd4B9EKX1 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.64■■□□□ 1.7
Ptchd4B9EKX1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Ptchd4B9EKX1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.64■■□□□ 1.7
Ptchd4B9EKX1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptchd4B9EKX1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptchd4B9EKX1 Cap2-205ENSMUST00000225824 1634 ntBASIC25.63■■□□□ 1.69
Ptchd4B9EKX1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptchd4B9EKX1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptchd4B9EKX1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ptchd4B9EKX1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ptchd4B9EKX1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptchd4B9EKX1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ptchd4B9EKX1 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.62■■□□□ 1.69
Ptchd4B9EKX1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ptchd4B9EKX1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.61■■□□□ 1.69
Ptchd4B9EKX1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Ptchd4B9EKX1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Ptchd4B9EKX1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ptchd4B9EKX1 Mir3960-201ENSMUST00000198213 73 ntBASIC25.59■■□□□ 1.69
Ptchd4B9EKX1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ptchd4B9EKX1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Ptchd4B9EKX1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.58■■□□□ 1.69
Ptchd4B9EKX1 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.58■■□□□ 1.69
Ptchd4B9EKX1 Scarna2-201ENSMUST00000157560 414 ntBASIC25.57■■□□□ 1.68
Ptchd4B9EKX1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ptchd4B9EKX1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Ptchd4B9EKX1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ptchd4B9EKX1 Gm45364-201ENSMUST00000210883 159 ntBASIC25.56■■□□□ 1.68
Ptchd4B9EKX1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Ptchd4B9EKX1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ptchd4B9EKX1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Ptchd4B9EKX1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Ptchd4B9EKX1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptchd4B9EKX1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptchd4B9EKX1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Ptchd4B9EKX1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Ptchd4B9EKX1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.54■■□□□ 1.68
Ptchd4B9EKX1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ptchd4B9EKX1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.53■■□□□ 1.68
Ptchd4B9EKX1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Ptchd4B9EKX1 Gm9806-201ENSMUST00000051080 552 ntBASIC25.53■■□□□ 1.68
Ptchd4B9EKX1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Ptchd4B9EKX1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Ptchd4B9EKX1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.51■■□□□ 1.67
Ptchd4B9EKX1 Gm13889-201ENSMUST00000099689 1386 ntBASIC25.51■■□□□ 1.67
Ptchd4B9EKX1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Ptchd4B9EKX1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.5■■□□□ 1.67
Ptchd4B9EKX1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ptchd4B9EKX1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ptchd4B9EKX1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ptchd4B9EKX1 Gm11687-201ENSMUST00000118911 886 ntBASIC25.49■■□□□ 1.67
Ptchd4B9EKX1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ptchd4B9EKX1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ptchd4B9EKX1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ptchd4B9EKX1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.47■■□□□ 1.67
Ptchd4B9EKX1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ptchd4B9EKX1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ptchd4B9EKX1 Gm16437-201ENSMUST00000025669 507 ntBASIC25.45■■□□□ 1.66
Ptchd4B9EKX1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ptchd4B9EKX1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ptchd4B9EKX1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Ptchd4B9EKX1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptchd4B9EKX1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25.43■■□□□ 1.66
Ptchd4B9EKX1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ptchd4B9EKX1 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.42■■□□□ 1.66
Ptchd4B9EKX1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms