Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd6A3KFM7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.07■□□□□ 0.8
Chd6A3KFM7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chd6A3KFM7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chd6A3KFM7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd6A3KFM7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chd6A3KFM7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.05■□□□□ 0.8
Chd6A3KFM7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.05■□□□□ 0.8
Chd6A3KFM7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd6A3KFM7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chd6A3KFM7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd6A3KFM7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd6A3KFM7 Particl-201ENSMUST00000205370 1560 ntBASIC20.04■□□□□ 0.8
Chd6A3KFM7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd6A3KFM7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chd6A3KFM7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.03■□□□□ 0.8
Chd6A3KFM7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd6A3KFM7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd6A3KFM7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chd6A3KFM7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chd6A3KFM7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd6A3KFM7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Chd6A3KFM7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd6A3KFM7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd6A3KFM7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chd6A3KFM7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20■□□□□ 0.79
Chd6A3KFM7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Chd6A3KFM7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chd6A3KFM7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Chd6A3KFM7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd6A3KFM7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd6A3KFM7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd6A3KFM7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chd6A3KFM7 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.97■□□□□ 0.79
Chd6A3KFM7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chd6A3KFM7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd6A3KFM7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd6A3KFM7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.96■□□□□ 0.79
Chd6A3KFM7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Chd6A3KFM7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chd6A3KFM7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Chd6A3KFM7 Gm45364-201ENSMUST00000210883 159 ntBASIC19.95■□□□□ 0.78
Chd6A3KFM7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd6A3KFM7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd6A3KFM7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd6A3KFM7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd6A3KFM7 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.94■□□□□ 0.78
Chd6A3KFM7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd6A3KFM7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd6A3KFM7 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.93■□□□□ 0.78
Chd6A3KFM7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd6A3KFM7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd6A3KFM7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd6A3KFM7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd6A3KFM7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd6A3KFM7 Gm13238-201ENSMUST00000117655 780 ntBASIC19.92■□□□□ 0.78
Chd6A3KFM7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd6A3KFM7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Chd6A3KFM7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.91■□□□□ 0.78
Chd6A3KFM7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chd6A3KFM7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.9■□□□□ 0.78
Chd6A3KFM7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.9■□□□□ 0.78
Chd6A3KFM7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd6A3KFM7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chd6A3KFM7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Chd6A3KFM7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.89■□□□□ 0.77
Chd6A3KFM7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd6A3KFM7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd6A3KFM7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.88■□□□□ 0.77
Chd6A3KFM7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd6A3KFM7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.88■□□□□ 0.77
Chd6A3KFM7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd6A3KFM7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd6A3KFM7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd6A3KFM7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Chd6A3KFM7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd6A3KFM7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd6A3KFM7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.85■□□□□ 0.77
Chd6A3KFM7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd6A3KFM7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.84■□□□□ 0.77
Chd6A3KFM7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Chd6A3KFM7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd6A3KFM7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd6A3KFM7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd6A3KFM7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Chd6A3KFM7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.82■□□□□ 0.76
Chd6A3KFM7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd6A3KFM7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd6A3KFM7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd6A3KFM7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.81■□□□□ 0.76
Chd6A3KFM7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd6A3KFM7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.81■□□□□ 0.76
Chd6A3KFM7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd6A3KFM7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Chd6A3KFM7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd6A3KFM7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd6A3KFM7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd6A3KFM7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd6A3KFM7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd6A3KFM7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 585.8 ms