Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12d-1A0N8R0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12d-1A0N8R0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav12d-1A0N8R0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12d-1A0N8R0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12d-1A0N8R0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12d-1A0N8R0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12d-1A0N8R0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trav12d-1A0N8R0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trav12d-1A0N8R0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12d-1A0N8R0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trav12d-1A0N8R0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trav12d-1A0N8R0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.92■□□□□ 0.62
Trav12d-1A0N8R0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.92■□□□□ 0.62
Trav12d-1A0N8R0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12d-1A0N8R0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12d-1A0N8R0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12d-1A0N8R0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12d-1A0N8R0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trav12d-1A0N8R0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12d-1A0N8R0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12d-1A0N8R0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trav12d-1A0N8R0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.9■□□□□ 0.62
Trav12d-1A0N8R0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12d-1A0N8R0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12d-1A0N8R0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav12d-1A0N8R0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Trav12d-1A0N8R0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12d-1A0N8R0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav12d-1A0N8R0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12d-1A0N8R0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12d-1A0N8R0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12d-1A0N8R0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12d-1A0N8R0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12d-1A0N8R0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav12d-1A0N8R0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trav12d-1A0N8R0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12d-1A0N8R0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.87■□□□□ 0.61
Trav12d-1A0N8R0 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.87■□□□□ 0.61
Trav12d-1A0N8R0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12d-1A0N8R0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav12d-1A0N8R0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12d-1A0N8R0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.86■□□□□ 0.61
Trav12d-1A0N8R0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav12d-1A0N8R0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav12d-1A0N8R0 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.84■□□□□ 0.61
Trav12d-1A0N8R0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav12d-1A0N8R0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.83■□□□□ 0.61
Trav12d-1A0N8R0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav12d-1A0N8R0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trav12d-1A0N8R0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12d-1A0N8R0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12d-1A0N8R0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12d-1A0N8R0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav12d-1A0N8R0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12d-1A0N8R0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12d-1A0N8R0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12d-1A0N8R0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12d-1A0N8R0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav12d-1A0N8R0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12d-1A0N8R0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.8■□□□□ 0.6
Trav12d-1A0N8R0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav12d-1A0N8R0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav12d-1A0N8R0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12d-1A0N8R0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12d-1A0N8R0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12d-1A0N8R0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12d-1A0N8R0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12d-1A0N8R0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav12d-1A0N8R0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav12d-1A0N8R0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trav12d-1A0N8R0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav12d-1A0N8R0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav12d-1A0N8R0 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.76■□□□□ 0.59
Trav12d-1A0N8R0 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.76■□□□□ 0.59
Trav12d-1A0N8R0 Particl-201ENSMUST00000205370 1560 ntBASIC18.76■□□□□ 0.59
Trav12d-1A0N8R0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12d-1A0N8R0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12d-1A0N8R0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12d-1A0N8R0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12d-1A0N8R0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav12d-1A0N8R0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.74■□□□□ 0.59
Trav12d-1A0N8R0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12d-1A0N8R0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trav12d-1A0N8R0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav12d-1A0N8R0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trav12d-1A0N8R0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trav12d-1A0N8R0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12d-1A0N8R0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav12d-1A0N8R0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trav12d-1A0N8R0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav12d-1A0N8R0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav12d-1A0N8R0 Zfp131-205ENSMUST00000223812 663 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms