Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Gm3854A0A1B0GSS6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm3854A0A1B0GSS6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Gm3854A0A1B0GSS6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Gm3854A0A1B0GSS6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Gm3854A0A1B0GSS6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.92■■□□□ 1.42
Gm3854A0A1B0GSS6 Gm11687-201ENSMUST00000118911 886 ntBASIC23.91■■□□□ 1.42
Gm3854A0A1B0GSS6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Gm3854A0A1B0GSS6 Gm9806-201ENSMUST00000051080 552 ntBASIC23.91■■□□□ 1.42
Gm3854A0A1B0GSS6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.91■■□□□ 1.42
Gm3854A0A1B0GSS6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm3854A0A1B0GSS6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Gm3854A0A1B0GSS6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.91■■□□□ 1.42
Gm3854A0A1B0GSS6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm3854A0A1B0GSS6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Gm3854A0A1B0GSS6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.9■■□□□ 1.42
Gm3854A0A1B0GSS6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Gm3854A0A1B0GSS6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm3854A0A1B0GSS6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Gm3854A0A1B0GSS6 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.89■■□□□ 1.41
Gm3854A0A1B0GSS6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm3854A0A1B0GSS6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Gm3854A0A1B0GSS6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm3854A0A1B0GSS6 Gm16437-201ENSMUST00000025669 507 ntBASIC23.88■■□□□ 1.41
Gm3854A0A1B0GSS6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm3854A0A1B0GSS6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.88■■□□□ 1.41
Gm3854A0A1B0GSS6 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.87■■□□□ 1.41
Gm3854A0A1B0GSS6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Gm3854A0A1B0GSS6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Gm3854A0A1B0GSS6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.87■■□□□ 1.41
Gm3854A0A1B0GSS6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Gm3854A0A1B0GSS6 Mir3960-201ENSMUST00000198213 73 ntBASIC23.86■■□□□ 1.41
Gm3854A0A1B0GSS6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.86■■□□□ 1.41
Gm3854A0A1B0GSS6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Gm3854A0A1B0GSS6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Gm3854A0A1B0GSS6 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.85■■□□□ 1.41
Gm3854A0A1B0GSS6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Gm3854A0A1B0GSS6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Gm3854A0A1B0GSS6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.84■■□□□ 1.41
Gm3854A0A1B0GSS6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Gm3854A0A1B0GSS6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.81■■□□□ 1.4
Gm3854A0A1B0GSS6 Zxda-201ENSMUST00000117281 2621 ntBASIC23.8■■□□□ 1.4
Gm3854A0A1B0GSS6 Gm37136-201ENSMUST00000194368 194 ntBASIC23.8■■□□□ 1.4
Gm3854A0A1B0GSS6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Gm3854A0A1B0GSS6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.8■■□□□ 1.4
Gm3854A0A1B0GSS6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Gm3854A0A1B0GSS6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Gm3854A0A1B0GSS6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.79■■□□□ 1.4
Gm3854A0A1B0GSS6 Gm45364-201ENSMUST00000210883 159 ntBASIC23.79■■□□□ 1.4
Gm3854A0A1B0GSS6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Gm3854A0A1B0GSS6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Gm3854A0A1B0GSS6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Gm3854A0A1B0GSS6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.78■■□□□ 1.4
Gm3854A0A1B0GSS6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Gm3854A0A1B0GSS6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Gm3854A0A1B0GSS6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.77■■□□□ 1.4
Gm3854A0A1B0GSS6 Gm12366-201ENSMUST00000121722 873 ntBASIC23.77■■□□□ 1.4
Gm3854A0A1B0GSS6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.77■■□□□ 1.4
Gm3854A0A1B0GSS6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Gm3854A0A1B0GSS6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.77■■□□□ 1.4
Gm3854A0A1B0GSS6 Gm5786-201ENSMUST00000085368 882 ntBASIC23.77■■□□□ 1.4
Gm3854A0A1B0GSS6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Gm3854A0A1B0GSS6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Gm3854A0A1B0GSS6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.75■■□□□ 1.39
Gm3854A0A1B0GSS6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Gm3854A0A1B0GSS6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Gm3854A0A1B0GSS6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Gm3854A0A1B0GSS6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Gm3854A0A1B0GSS6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Gm3854A0A1B0GSS6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Gm3854A0A1B0GSS6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Gm3854A0A1B0GSS6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Gm3854A0A1B0GSS6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
Gm3854A0A1B0GSS6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Gm3854A0A1B0GSS6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Gm3854A0A1B0GSS6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.71■■□□□ 1.39
Gm3854A0A1B0GSS6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Gm3854A0A1B0GSS6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.7■■□□□ 1.38
Gm3854A0A1B0GSS6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm3854A0A1B0GSS6 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.69■■□□□ 1.38
Gm3854A0A1B0GSS6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Gm3854A0A1B0GSS6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Gm3854A0A1B0GSS6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Gm3854A0A1B0GSS6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Gm3854A0A1B0GSS6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Gm3854A0A1B0GSS6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.66■■□□□ 1.38
Gm3854A0A1B0GSS6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Gm3854A0A1B0GSS6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.66■■□□□ 1.38
Gm3854A0A1B0GSS6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Gm3854A0A1B0GSS6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Gm3854A0A1B0GSS6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Gm3854A0A1B0GSS6 Gm27502-201ENSMUST00000183495 199 ntBASIC23.65■■□□□ 1.38
Gm3854A0A1B0GSS6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Gm3854A0A1B0GSS6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
Gm3854A0A1B0GSS6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Gm3854A0A1B0GSS6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Gm3854A0A1B0GSS6 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.63■■□□□ 1.37
Gm3854A0A1B0GSS6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Gm3854A0A1B0GSS6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Gm3854A0A1B0GSS6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms