Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rpl23a-ps3A0A140T8M7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rpl23a-ps3A0A140T8M7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.41■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpl23a-ps3A0A140T8M7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rpl23a-ps3A0A140T8M7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.33■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms